RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 ANKRD20A3Q5VUR7 823 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 SESTD1Q86VW0 696 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 TRIM50Q86XT4 487 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 HACE1Q8IYU2 909 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 RCOR2Q8IZ40 523 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 FBXO25Q8TCJ0 367 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 ATP8B4Q8TF62 1192 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.29
BDNF-203ENST00000395978 TATDN2Q93075 761 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 LENG9Q96B70 501 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 ARHGEF26Q96DR7 871 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 BTBD6Q96KE9 485 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 TRAIPQ9BWF2 469 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 IKZF4Q9H2S9 585 aa6.96□□□□□ -1.29
BDNF-203ENST00000395978 NGRNQ9NPE2 291 aaKnown RBP6.96□□□□□ -1.29
BDNF-203ENST00000395978 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.96□□□□□ -1.29
BDNF-203ENST00000395978 DDX56Q9NY93 547 aaKnown RBP6.96□□□□□ -1.29
BDNF-203ENST00000395978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 RASSF10A6NK89 507 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 M0QZ92 97 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 FANCGO15287 622 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 LYPLA2O95372 231 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 BRAFP15056 766 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 CA4P22748 312 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 PTGER2P43116 358 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 RASSF2P50749 326 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 SEC24CP53992 1094 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 SPIRE1Q08AE8 756 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 GPS1Q13098 491 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 SLC29A2Q14542 456 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 NFIL3Q16649 462 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 FASTKD5Q7L8L6 764 aaKnown RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 SIAH1Q8IUQ4 282 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 SRRM1Q8IYB3 904 aaKnown RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 TSEN2Q8NCE0 465 aaKnown RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 RNF34Q969K3 372 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 C18orf8Q96DM3 657 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 TTC25Q96NG3 672 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 SMARCAD1Q9H4L7 1026 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 ELP3Q9H9T3 547 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 PCSK1NQ9UHG2 260 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 MYH3P11055 1940 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 ASB14A6NK59 587 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 RASA4BC9J798 803 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 ANKRD63C9JTQ0 380 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 I3L4J1 428 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 MAPK13O15264 365 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 MEFVO15553 781 aaPredicted RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 RASA4O43374 803 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 ATP9AO75110 1047 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 SLC25A27O95847 323 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 SYF2O95926 243 aaKnown RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 CLTAP09496 248 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 KRT3P12035 628 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 RRM1P23921 792 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 TNFRSF8P28908 595 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 ZNF131P52739 623 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 GCNT1Q02742 428 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 NR1H3Q13133 447 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 ITGB3BPQ13352 177 aaPredicted RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 CATSPER4Q7RTX7 472 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 GDAP1Q8TB36 358 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 LNX1Q8TBB1 728 aaPredicted RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 ZNF473Q8WTR7 871 aaKnown RBP6.96□□□□□ -1.3
BDNF-203ENST00000395978 KAT5Q92993 513 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 FAM149B1Q96BN6 582 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 NIF3L1Q9GZT8 377 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 TMBIM4Q9HC24 238 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 ASNSD1Q9NWL6 643 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 PCDHA2Q9Y5H9 948 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 MAD1L1Q9Y6D9 718 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 TJP1Q07157 1748 aa6.96□□□□□ -1.3
BDNF-203ENST00000395978 CAPN9O14815 690 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ARL4CP56559 192 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 PTGISQ16647 500 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ASTE1Q2TB18 679 aaPredicted RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 BSPRYQ5W0U4 402 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 TTC39CQ8N584 583 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 GPATCH11Q8N954 259 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 FEZF2Q8TBJ5 459 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 HSPH1Q92598 858 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 FAM129AQ9BZQ8 928 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 FAM49AQ9H0Q0 323 aaPredicted RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 TAS2R14Q9NYV8 317 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 IRS2Q9Y4H2 1338 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ATRNL1Q5VV63 1379 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 THSD7AQ9UPZ6 1657 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 SHANK3Q9BYB0 1731 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 TOGARAM1Q9Y4F4 1720 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 TRIM66O15016 1216 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 OGTO15294 1046 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ASAP2O43150 1006 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 TOM1L1O75674 476 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 FAM107AO95990 144 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 MT-ND3P03897 115 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 TCF7P36402 384 aaPredicted RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 MKRN4PQ13434 485 aaPredicted RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 PIGHQ14442 188 aaPredicted RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 CCDC38Q502W7 563 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 PCGF5Q86SE9 256 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms