RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 UBR7Q8N806 425 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 PRELID2Q8N945 189 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 FAM76AQ8TAV0 307 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 TRIM11Q96F44 468 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 BTBD6Q96KE9 485 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 SPATA33Q96N06 139 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 RUFY1Q96T51 708 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 RAB17Q9H0T7 212 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 NUB1Q9Y5A7 615 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 MGAMO43451 1857 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 PLXNA1Q9UIW2 1896 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 OGTO15294 1046 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 SPOPO43791 374 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 SHOX2O60902 331 aaPredicted RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 PHF2O75151 1096 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 ASS1P00966 412 aaKnown RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 PYGMP11217 842 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 CAPN2P17655 700 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 PROZP22891 400 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 CHRNA3P32297 505 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 ACTN2P35609 894 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 GJA5P36382 358 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 TNFSF9P41273 254 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 DR1Q01658 176 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 NCOA4Q13772 614 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 TTLL12Q14166 644 aaPredicted RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 MAPK6Q16659 721 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 SMYD5Q6GMV2 418 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 TRIM72Q6ZMU5 477 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 CPNE8Q86YQ8 564 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 FBXO16Q8IX29 292 aaPredicted RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 DHX37Q8IY37 1157 aaKnown RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 RNF149Q8NC42 400 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 ARL8AQ96BM9 186 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 LRRC45Q96CN5 670 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 JPH2Q9BR39 696 aaPredicted RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 ERP44Q9BS26 406 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 SYT17Q9BSW7 474 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 C2orf40Q9H1Z8 148 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 PTPRHQ9HD43 1115 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 MROH7Q68CQ1 1323 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 KRT14P02533 472 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 PRKCBP05771 671 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 RRM1P23921 792 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 PTGIRP43119 386 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 ZNF132P52740 706 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 SIX1Q15475 284 aaPredicted RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 UAP1Q16222 522 aaPredicted RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 SEZ6Q53EL9 994 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 SEL1L2Q5TEA6 688 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 TMEM270Q6UE05 265 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 LRIG3Q6UXM1 1119 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 ARMC9Q7Z3E5 817 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 ADAT2Q7Z6V5 191 aaKnown RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 SLC13A5Q86YT5 568 aaPredicted RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 ZBTB8OSQ8IWT0 167 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 ABRAQ8N0Z2 381 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 LRRC71Q8N4P6 559 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 CPA5Q8WXQ8 436 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 VCPIP1Q96JH7 1222 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 TRIM51Q9BSJ1 452 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 SMARCAD1Q9H4L7 1026 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 CPSF3Q9UKF6 684 aaKnown RBP9.67□□□□□ -0.86
TDP1-202ENST00000393452 UMODL1Q5DID0 1318 aa9.67□□□□□ -0.86
TDP1-202ENST00000393452 ASB14A6NK59 587 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 H0YGN5 161 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 HBP1O60381 514 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 SRGAP2CP0DJJ0 459 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 TXNP10599 105 aaKnown RBP9.66□□□□□ -0.86
TDP1-202ENST00000393452 HSD17B3P37058 310 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 SLC1A1P43005 524 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 NSFP46459 744 aaKnown RBP9.66□□□□□ -0.86
TDP1-202ENST00000393452 RWDD2BP57060 319 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 NOMO3P69849 1222 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 SNAPC2Q13487 334 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 TTLL4Q14679 1199 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 SURF1Q15526 300 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 EMC10Q5UCC4 262 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 SCARA3Q6AZY7 606 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 TSHZ1Q6ZSZ6 1077 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 TMC3Q7Z5M5 1100 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 PHF13Q86YI8 300 aaPredicted RBP9.66□□□□□ -0.86
TDP1-202ENST00000393452 JAMLQ86YT9 394 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 C12orf50Q8NA57 414 aaPredicted RBP9.66□□□□□ -0.86
TDP1-202ENST00000393452 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
TDP1-202ENST00000393452 COPS5Q92905 334 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 CYFIP2Q96F07 1278 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 FZD8Q9H461 694 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 ANAPC7Q9UJX3 599 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 PCDHB4Q9Y5E5 795 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 NFS1Q9Y697 457 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 SCN4AP35499 1836 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 ACKR2O00590 384 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 CST3P01034 146 aaPredicted RBP9.66□□□□□ -0.86
TDP1-202ENST00000393452 CFHP08603 1231 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 GNA15P30679 374 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 MAPK4P31152 587 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 FLT3P36888 993 aa9.66□□□□□ -0.86
TDP1-202ENST00000393452 PTP4A2Q12974 167 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms