RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.29■□□□□ 0.68
CD40-201ENST00000372276 ZNF516Q92618 1163 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 ART4Q93070 314 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 MSTO1Q9BUK6 570 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 ROPN1BQ9BZX4 212 aaPredicted RBP19.29■□□□□ 0.68
CD40-201ENST00000372276 TRIM31Q9BZY9 425 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 ROPN1Q9HAT0 212 aaPredicted RBP19.29■□□□□ 0.68
CD40-201ENST00000372276 GPRC5DQ9NZD1 345 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 GRHL1Q9NZI5 618 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 LRRIQ4A6NIV6 560 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 ADCY3O60266 1144 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 PROSCO94903 275 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 GAS8O95995 478 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 RARAP10276 462 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 EDNRBP24530 442 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 C1QBPQ07021 282 aaKnown RBP19.29■□□□□ 0.68
CD40-201ENST00000372276 TARBP2Q15633 366 aaKnown RBP19.29■□□□□ 0.68
CD40-201ENST00000372276 IER5Q5VY09 327 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 ZDHHC24Q6UX98 284 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 ADAT2Q7Z6V5 191 aaKnown RBP19.29■□□□□ 0.68
CD40-201ENST00000372276 ABRAQ8N0Z2 381 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 TLCD1Q96CP7 247 aa19.29■□□□□ 0.68
CD40-201ENST00000372276 NDC80O14777 642 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 KIAA0754O94854 1291 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 CLTAP09496 248 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 MARCKSL1P49006 195 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 SOX10P56693 466 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 SP4Q02446 784 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 SGO2Q562F6 1265 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 TDRD10Q5VZ19 366 aaKnown RBP19.28■□□□□ 0.68
CD40-201ENST00000372276 RHOT1Q8IXI2 618 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 GPC2Q8N158 579 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 FBXO25Q8TCJ0 367 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 SEPT1Q8WYJ6 367 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 C2orf40Q9H1Z8 148 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 BCCIPQ9P287 314 aaKnown RBP eCLIP19.28■□□□□ 0.68
CD40-201ENST00000372276 SLC12A6Q9UHW9 1150 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 SSC5DA1L4H1 1573 aa19.28■□□□□ 0.68
CD40-201ENST00000372276 LOC102724159A0A0B4J2E5 919 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 GMNCA6NCL1 334 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 ATMINO43313 823 aaPredicted RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 MAFO75444 373 aaPredicted RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 AGTP01019 485 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 ATP4AP20648 1035 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 ACO1P21399 889 aaKnown RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 RPL21P46778 160 aaKnown RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 STAT5BP51692 787 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 NLRP11P59045 1033 aaKnown RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 GUCY1A3Q02108 690 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 LMNB2Q03252 620 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 MXD4Q14582 209 aaPredicted RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 PWP2Q15269 919 aaKnown RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 PPP1R7Q15435 360 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 SIX1Q15475 284 aaPredicted RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 MON1BQ7L1V2 547 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 NLRP14Q86W24 1093 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 ASAP3Q8TDY4 903 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 BBXQ8WY36 941 aaPredicted RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 TMEM143Q96AN5 459 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 FOXP3Q9BZS1 431 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 NOVA2Q9UNW9 492 aaKnown RBP19.27■□□□□ 0.68
CD40-201ENST00000372276 PCDHB4Q9Y5E5 795 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 FAM169AQ9Y6X4 670 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 ADGRA2Q96PE1 1338 aa19.27■□□□□ 0.68
CD40-201ENST00000372276 THAP12O43422 761 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 LSM8O95777 96 aaKnown RBP19.26■□□□□ 0.67
CD40-201ENST00000372276 SLC25A27O95847 323 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 HPDP32754 393 aaPredicted RBP19.26■□□□□ 0.67
CD40-201ENST00000372276 SP2Q02086 613 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 TAP1Q03518 808 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 TTC27Q6P3X3 843 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 CRELD2Q6UXH1 353 aaPredicted RBP19.26■□□□□ 0.67
CD40-201ENST00000372276 WDR49Q8IV35 697 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 ATL2Q8NHH9 583 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 CCHCR1Q8TD31 782 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 FAXDC2Q96IV6 333 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 CCT8L2Q96SF2 557 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 PI4K2AQ9BTU6 479 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 MRPL4Q9BYD3 311 aaKnown RBP19.26■□□□□ 0.67
CD40-201ENST00000372276 ZNF518BQ9C0D4 1074 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 AZI2Q9H6S1 392 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 GGA3Q9NZ52 723 aa19.26■□□□□ 0.67
CD40-201ENST00000372276 CLDN3O15551 220 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 FARP2O94887 1054 aaPredicted RBP19.25■□□□□ 0.67
CD40-201ENST00000372276 CALB1P05937 261 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 ATP5DP30049 168 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 GNA15P30679 374 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 YWHAEP62258 255 aaKnown RBP19.25■□□□□ 0.67
CD40-201ENST00000372276 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
CD40-201ENST00000372276 PLEKHA7Q6IQ23 1121 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 METTL7BQ6UX53 244 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 SEPT14Q6ZU15 432 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 BRSK2Q8IWQ3 736 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 ZBTB8OSQ8IWT0 167 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 KATNAL2Q8IYT4 538 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 PROCA1Q8NCQ7 364 aaPredicted RBP19.25■□□□□ 0.67
CD40-201ENST00000372276 OR2W6PQ8NHA6 318 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 ZNF473Q8WTR7 871 aaKnown RBP19.25■□□□□ 0.67
CD40-201ENST00000372276 ACP6Q9NPH0 428 aa19.25■□□□□ 0.67
CD40-201ENST00000372276 PARVAQ9NVD7 372 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms