RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GPR161Q8N6U8 529 aaKnown RBP15.84■□□□□ 0.13
CXCL12-201ENST00000343575 CXorf38Q8TB03 319 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 ACAP3Q96P50 834 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 PI4K2AQ9BTU6 479 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 UBXN6Q9BZV1 441 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 MTMR12Q9C0I1 747 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.84■□□□□ 0.13
CXCL12-201ENST00000343575 APEX2Q9UBZ4 518 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 HLA-DRAP01903 254 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 DSC3Q14574 896 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 MTF1Q14872 753 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 KYAT1Q16773 422 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 JADE1Q6IE81 842 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 ANKRD33Q7Z3H0 272 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 GPIHBP1Q8IV16 184 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 KAT5Q92993 513 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 IPPQ9Y573 584 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 SOWAHDA6NJG2 315 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 IL18RAPO95256 599 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 SURF1Q15526 300 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 HGSNATQ68CP4 663 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 RAD9BQ6WBX8 426 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 TRAPPC11Q7Z392 1133 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 HELQQ8TDG4 1101 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 TATDN2Q93075 761 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 ZMAT2Q96NC0 199 aaKnown RBP15.83■□□□□ 0.12
CXCL12-201ENST00000343575 ASB7Q9H672 318 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 CHST12Q9NRB3 414 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 DNAJC12Q9UKB3 198 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 SQORQ9Y6N5 450 aa15.83■□□□□ 0.12
CXCL12-201ENST00000343575 MEIS3P2A8K0S8 358 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 GPR182O15218 404 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 ARHGAP6O43182 974 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 PQBP1O60828 265 aaKnown RBP15.82■□□□□ 0.12
CXCL12-201ENST00000343575 AKAP5P24588 427 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 CETN1Q12798 172 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 DUOXA2Q1HG44 320 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 CACNA2D4Q7Z3S7 1137 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 CAGE1Q8TC20 777 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 SNX27Q96L92 541 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 KREMEN1Q96MU8 473 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 APOBEC3GQ9HC16 384 aaKnown RBP15.82■□□□□ 0.12
CXCL12-201ENST00000343575 RNF19AQ9NV58 838 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 PSD3Q9NYI0 1048 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 CWC15Q9P013 229 aaKnown RBP15.82■□□□□ 0.12
CXCL12-201ENST00000343575 SIX4Q9UIU6 781 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 UMODL1Q5DID0 1318 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 RECQL4O94761 1208 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 PLEKP08567 350 aaPredicted RBP15.82■□□□□ 0.12
CXCL12-201ENST00000343575 AP3M2P53677 418 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 TFAMQ00059 246 aaKnown RBP15.82■□□□□ 0.12
CXCL12-201ENST00000343575 FAAP100Q0VG06 881 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 BIRC3Q13489 604 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 ZBTB6Q15916 424 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 XKR4Q5GH76 650 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 C1orf53Q5VUE5 145 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 TWF2Q6IBS0 349 aaKnown RBP15.82■□□□□ 0.12
CXCL12-201ENST00000343575 SPOPLQ6IQ16 392 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 C1orf127Q8N9H9 656 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 PLEKHA5Q9HAU0 1116 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 AIPL1Q9NZN9 384 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 ARHGAP20Q9P2F6 1191 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 PCDHB2Q9Y5E7 798 aa15.82■□□□□ 0.12
CXCL12-201ENST00000343575 ERICH4A6NGS2 130 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 PAK2Q13177 524 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 DRAP1Q14919 205 aaPredicted RBP15.81■□□□□ 0.12
CXCL12-201ENST00000343575 TRIM60Q495X7 471 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 IRF2BP2Q7Z5L9 587 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 RTN4RL1Q86UN2 441 aaPredicted RBP15.81■□□□□ 0.12
CXCL12-201ENST00000343575 SYN2Q92777 582 aaPredicted RBP15.81■□□□□ 0.12
CXCL12-201ENST00000343575 TRAIPQ9BWF2 469 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 STK33Q9BYT3 514 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 TRIM6Q9C030 488 aaPredicted RBP15.81■□□□□ 0.12
CXCL12-201ENST00000343575 XYLT2Q9H1B5 865 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 UBE2TQ9NPD8 197 aaPredicted RBP15.81■□□□□ 0.12
CXCL12-201ENST00000343575 FAM105AQ9NUU6 356 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 RALGAPA2Q2PPJ7 1873 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 TET1Q8NFU7 2136 aa15.81■□□□□ 0.12
CXCL12-201ENST00000343575 F8VZ95 297 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 NBNO60934 754 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 SELPP16109 830 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 GUCY2FP51841 1108 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 CDK17Q00537 523 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 TLE2Q04725 743 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 NCOA4Q13772 614 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 TUBB2AQ13885 445 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 RAPGEF1Q13905 1077 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 LRRC8DQ7L1W4 858 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 APBB1IPQ7Z5R6 666 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-201ENST00000343575 ANKLE1Q8NAG6 615 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 USP38Q8NB14 1042 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 RABGGTAQ92696 567 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 PAWRQ96IZ0 340 aaKnown RBP15.8■□□□□ 0.12
CXCL12-201ENST00000343575 TOX2Q96NM4 488 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 TUBB2BQ9BVA1 445 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 APOL6Q9BWW8 343 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 CNTN3Q9P232 1028 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 MYO6Q9UM54 1294 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 C2CD2Q9Y426 696 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 FOXN3O00409 490 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms