RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 PPP1R13LQ8WUF5 828 aa18.14■□□□□ 0.49
PDCD1-201ENST00000334409 LSM14BQ9BX40 385 aaKnown RBP18.14■□□□□ 0.49
PDCD1-201ENST00000334409 YIPF3Q9GZM5 350 aa18.14■□□□□ 0.49
PDCD1-201ENST00000334409 GPRC5CQ9NQ84 441 aa18.14■□□□□ 0.49
PDCD1-201ENST00000334409 SMARCAL1Q9NZC9 954 aa18.14■□□□□ 0.49
PDCD1-201ENST00000334409 BHMG1C9JSJ3 638 aaPredicted RBP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 VIMP08670 466 aaKnown RBP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 CNGA1P29973 690 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 HLTFQ14527 1009 aaKnown RBP eCLIP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 NAB2Q15742 525 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 TRPM8Q7Z2W7 1104 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 IFT74Q96LB3 600 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 PAPOLBQ9NRJ5 636 aaKnown RBP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 IRAK4Q9NWZ3 460 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 EHD2Q9NZN4 543 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 DBR1Q9UK59 544 aaKnown RBP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 NCK2O43639 380 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 IGHA2P01877 340 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 XRCC5P13010 732 aaKnown RBP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 HOOK3Q86VS8 718 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 SFR1Q86XK3 245 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 TLCD1Q96CP7 247 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 CCDC134Q9H6E4 229 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 NLRC4Q9NPP4 1024 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 AIPL1Q9NZN9 384 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 CNOT8Q9UFF9 292 aaKnown RBP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 SRRDQ9UH36 339 aa18.13■□□□□ 0.49
PDCD1-201ENST00000334409 NOVA2Q9UNW9 492 aaKnown RBP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.13■□□□□ 0.49
PDCD1-201ENST00000334409 FKTNO75072 461 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 HIP1RO75146 1068 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 NPTXRO95502 500 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 OATP04181 439 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 MRPS35P82673 323 aaKnown RBP18.12■□□□□ 0.49
PDCD1-201ENST00000334409 UAP1Q16222 522 aaPredicted RBP18.12■□□□□ 0.49
PDCD1-201ENST00000334409 SLC18A3Q16572 532 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 EDRF1Q3B7T1 1238 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 FAM160B1Q5W0V3 765 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 TBC1D1Q86TI0 1168 aaPredicted RBP18.12■□□□□ 0.49
PDCD1-201ENST00000334409 ZNF317Q96PQ6 595 aaPredicted RBP18.12■□□□□ 0.49
PDCD1-201ENST00000334409 KCTD10Q9H3F6 313 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 TMEM59LQ9UK28 342 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 L3MBTL1Q9Y468 752 aa18.12■□□□□ 0.49
PDCD1-201ENST00000334409 ZSCAN5CA6NGD5 496 aaPredicted RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 E7ENQ6 273 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 RAD51CO43502 376 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 BUB1O43683 1085 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 TBCAO75347 108 aaKnown RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 ATP2A2P16615 1042 aaKnown RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 POLR2FP61218 127 aaKnown RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 XKR3Q5GH77 459 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 THEMIS2Q5TEJ8 643 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 MFSD14CQ5VZR4 134 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 MTHFD1LQ6UB35 978 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 OTUD6AQ7L8S5 288 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 CROCCP2Q86T23 111 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 GALNT15Q8N3T1 639 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 PPTC7Q8NI37 304 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 PSMB7Q99436 277 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 PLCD4Q9BRC7 762 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 CYP26B1Q9NR63 512 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 ANKEF1Q9NU02 776 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 GNEQ9Y223 722 aaKnown RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 LRRD1A4D1F6 860 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 BTNL10A8MVZ5 291 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 FAM13AO94988 1023 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 LGALS2P05162 132 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 MAGOHP61326 146 aaKnown RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 BEX3Q00994 111 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 CACNB2Q08289 660 aaPredicted RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 LBRQ14739 615 aaKnown RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 SDCCAG8Q86SQ7 713 aaPredicted RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 KCTD17Q8N5Z5 321 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 MYCT1Q8N699 235 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 USP38Q8NB14 1042 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 SCFD1Q8WVM8 642 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 MAGOHBQ96A72 148 aaKnown RBP18.11■□□□□ 0.49
PDCD1-201ENST00000334409 BEGAINQ9BUH8 593 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 RNPEPQ9H4A4 650 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 DNAH12Q6ZR08 3092 aa18.11■□□□□ 0.49
PDCD1-201ENST00000334409 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
PDCD1-201ENST00000334409 LGR5O75473 907 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 ECHS1P30084 290 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 CASP5P51878 434 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 ATP11AP98196 1134 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 SGSM1Q2NKQ1 1148 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 ANKRD20A2Q5SQ80 823 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 FAM102BQ5T8I3 360 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 ANKRD20A1Q5TYW2 823 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 ANKRD20A3Q5VUR7 823 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 TLK2Q86UE8 772 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 LMNTD2Q8IXW0 634 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 DAW1Q8N136 415 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 RAET1EQ8TD07 263 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 TRAPPC12Q8WVT3 735 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 DTNBP1Q96EV8 351 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 MS4A14Q96JA4 679 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 OSBPL1AQ9BXW6 950 aa18.1■□□□□ 0.49
PDCD1-201ENST00000334409 GANQ9H2C0 597 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms