RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KANK3Q6NY19 840 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 CD302Q8IX05 232 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 KIF12Q96FN5 646 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 PYM1Q9BRP8 204 aaKnown RBP30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 PLEKHA4Q9H4M7 779 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 POMKQ9H5K3 350 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 CPSF3Q9UKF6 684 aaKnown RBP30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 NUB1Q9Y5A7 615 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 ATP6V1DQ9Y5K8 247 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 LACTBL1A8MY62 500 aa30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 TGM5O43548 720 aa30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 XPOTO43592 962 aaKnown RBP30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 WEE2P0C1S8 567 aa30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 KRT85P78386 507 aa30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 GPR149Q86SP6 731 aa30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 RNF135Q8IUD6 432 aa30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 CMASQ8NFW8 434 aaPredicted RBP30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 TRIM9Q9C026 710 aa30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 AGO2Q9UKV8 859 aaKnown RBP30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 UBQLN1Q9UMX0 589 aaKnown RBP30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 NR2E1Q9Y466 385 aa30.06■■■□□ 2.4
ATPAF1-201ENST00000329231 C5orf42Q9H799 3197 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 DCXO43602 365 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 ADRB2P07550 413 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 CYP3A5P20815 502 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 BRCC3P46736 316 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 LILRA6Q6PI73 481 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 C15orf39Q6ZRI6 1047 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 POMGNT1Q8WZA1 660 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 CLSTN3Q9BQT9 956 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 TUBGCP4Q9UGJ1 667 aa30.05■■■□□ 2.4
ATPAF1-201ENST00000329231 TISP43B9A030 160 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 I3L4J1 428 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 SPATA31D3P0C874 917 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 MYBP10242 640 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 TKTP29401 623 aaKnown RBP30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 ASIC1P78348 528 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 SPAG1Q07617 926 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 KCNA1Q09470 495 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 ZBTB6Q15916 424 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 CNNM4Q6P4Q7 775 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 SPATA31D4Q6ZUB0 917 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 ANKS3Q6ZW76 656 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 STXBP4Q6ZWJ1 553 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 FAM212AQ96EL1 285 aa30.04■■■□□ 2.4
ATPAF1-201ENST00000329231 ACOT2P49753 483 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 CASP5P51878 434 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 POU5F1Q01860 360 aaKnown RBP30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 CYP26C1Q6V0L0 522 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 SYCP3Q8IZU3 236 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 KREMEN2Q8NCW0 462 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 LEO1Q8WVC0 666 aaPredicted RBP30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 SPATA32Q96LK8 384 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 C7orf25Q9BPX7 421 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 TSHZ2Q9NRE2 1034 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 MTRRQ9UBK8 725 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 KCNH3Q9ULD8 1083 aa30.03■■■□□ 2.4
ATPAF1-201ENST00000329231 SYN3O14994 580 aa30.02■■■□□ 2.4
ATPAF1-201ENST00000329231 LRPAP1P30533 357 aa30.02■■■□□ 2.4
ATPAF1-201ENST00000329231 RHOBTB2Q9BYZ6 727 aa30.02■■■□□ 2.4
ATPAF1-201ENST00000329231 IKZF4Q9H2S9 585 aa30.02■■■□□ 2.4
ATPAF1-201ENST00000329231 TMEM206Q9H813 350 aa30.02■■■□□ 2.4
ATPAF1-201ENST00000329231 MUTYHQ9UIF7 546 aa30.02■■■□□ 2.4
ATPAF1-201ENST00000329231 BACE2Q9Y5Z0 518 aa30.02■■■□□ 2.4
ATPAF1-201ENST00000329231 CCDC195A0A1B0GUA6 201 aa30.01■■■□□ 2.39
ATPAF1-201ENST00000329231 SP100P23497 879 aaPredicted RBP30.01■■■□□ 2.39
ATPAF1-201ENST00000329231 ADSSP30520 456 aa30.01■■■□□ 2.39
ATPAF1-201ENST00000329231 MCM4P33991 863 aa30.01■■■□□ 2.39
ATPAF1-201ENST00000329231 FGFBP2Q9BYJ0 223 aa30.01■■■□□ 2.39
ATPAF1-201ENST00000329231 ASB7Q9H672 318 aa30.01■■■□□ 2.39
ATPAF1-201ENST00000329231 ZDHHC7Q9NXF8 308 aa30.01■■■□□ 2.39
ATPAF1-201ENST00000329231 DERAQ9Y315 318 aa30.01■■■□□ 2.39
ATPAF1-201ENST00000329231 PLXNA3P51805 1871 aa30■■■□□ 2.39
ATPAF1-201ENST00000329231 RAB33AQ14088 237 aa30■■■□□ 2.39
ATPAF1-201ENST00000329231 JADE1Q6IE81 842 aa30■■■□□ 2.39
ATPAF1-201ENST00000329231 BEST2Q8NFU1 509 aa30■■■□□ 2.39
ATPAF1-201ENST00000329231 SUSD3Q96L08 255 aa30■■■□□ 2.39
ATPAF1-201ENST00000329231 FBXW11Q9UKB1 542 aa30■■■□□ 2.39
ATPAF1-201ENST00000329231 PDCD11Q14690 1871 aaKnown RBP29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 VWA8A3KMH1 1905 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 ADAM12O43184 909 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 RFPL2O75678 378 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 PRPF6O94906 941 aaKnown RBP29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 CMA1P23946 247 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 OR1D2P34982 312 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 TMEM132DQ14C87 1099 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 TMEM31Q5JXX7 168 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 SPATA1Q5VX52 437 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 CCDC149Q6ZUS6 474 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 CEP57L1Q8IYX8 460 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 SCAND2PQ9GZW5 306 aaPredicted RBP29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 USTQ9Y2C2 406 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 CDY1Q9Y6F8 540 aa29.99■■■□□ 2.39
ATPAF1-201ENST00000329231 H7C4K7 107 aa29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 GPR37L1O60883 481 aa29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 PAPLNO95428 1278 aa29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 GARTP22102 1010 aa29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 VARS2Q5ST30 1063 aaKnown RBP29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 LIN9Q5TKA1 542 aa29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 APPL2Q8NEU8 664 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms