RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 MID2Q9UJV3 735 aa18.19■□□□□ 0.5
GABRB3-202ENST00000311550 RAB21Q9UL25 225 aa18.19■□□□□ 0.5
GABRB3-202ENST00000311550 DDTLA6NHG4 134 aaPredicted RBP18.19■□□□□ 0.5
GABRB3-202ENST00000311550 LMNAP02545 664 aaKnown RBP18.19■□□□□ 0.5
GABRB3-202ENST00000311550 SREBF1P36956 1147 aa18.19■□□□□ 0.5
GABRB3-202ENST00000311550 AP3M2P53677 418 aa18.19■□□□□ 0.5
GABRB3-202ENST00000311550 EPS8L3Q8TE67 593 aaKnown RBP18.19■□□□□ 0.5
GABRB3-202ENST00000311550 GRAP2O75791 330 aa18.19■□□□□ 0.5
GABRB3-202ENST00000311550 SEZ6Q53EL9 994 aa18.19■□□□□ 0.5
GABRB3-202ENST00000311550 TWF2Q6IBS0 349 aaKnown RBP18.19■□□□□ 0.5
GABRB3-202ENST00000311550 TRPM8Q7Z2W7 1104 aa18.19■□□□□ 0.5
GABRB3-202ENST00000311550 AGR3Q8TD06 166 aa18.19■□□□□ 0.5
GABRB3-202ENST00000311550 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.19■□□□□ 0.5
GABRB3-202ENST00000311550 FAM237AA0A1B0GTK4 181 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 MAGEA4P43358 317 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 KPNA2P52292 529 aaKnown RBP18.18■□□□□ 0.5
GABRB3-202ENST00000311550 MDH1BQ5I0G3 518 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 AP1ARQ63HQ0 302 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 LRRC43Q8N309 656 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 CYP2W1Q8TAV3 490 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 PRMT6Q96LA8 375 aaPredicted RBP18.18■□□□□ 0.5
GABRB3-202ENST00000311550 TARS2Q9BW92 718 aaKnown RBP18.18■□□□□ 0.5
GABRB3-202ENST00000311550 ABI1Q8IZP0 508 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 MYCBPAPQ8TBZ2 947 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 SLC20A1Q8WUM9 679 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 TBX20Q9UMR3 447 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 AGAP1Q9UPQ3 857 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 APRTP07741 180 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 LCP1P13796 627 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 MICALL2Q8IY33 904 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 BBS5Q8N3I7 341 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 SLC4A9Q96Q91 983 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 FAM47DPA6NHR8 397 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 P4HA2O15460 535 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 COPS2P61201 443 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 KCNK18Q7Z418 384 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 BLOC1S4Q9NUP1 217 aa18.18■□□□□ 0.5
GABRB3-202ENST00000311550 PDGFRAP16234 1089 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 ANKRD20A4Q4UJ75 823 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 ANKRD20A8PQ5CZ79 823 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 ANKRD20A2Q5SQ80 823 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 ANKRD20A1Q5TYW2 823 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 SERPINI1Q99574 410 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 POP1Q99575 1024 aaKnown RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 YIPF3Q9GZM5 350 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 GTF3C4Q9UKN8 822 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 MYL3P08590 195 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 ITGA4P13612 1032 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 MX2P20592 715 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 GTF2H1P32780 548 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 EVX2Q03828 476 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 TRIM67Q6ZTA4 783 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 CCNYL1Q8N7R7 359 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 ERP27Q96DN0 273 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 ATG4CQ96DT6 458 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 PABPC3Q9H361 631 aaKnown RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 RAB6BQ9NRW1 208 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 SENP1Q9P0U3 644 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 CHMP2BQ9UQN3 213 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 F8VZ95 297 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 APOL1O14791 398 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 RFC1P35251 1148 aaPredicted RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 SESN2P58004 480 aaPredicted RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 RIMS1Q86UR5 1692 aaKnown RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 GYS1P13807 737 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 CDKL3Q8IVW4 592 aaPredicted RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 MMP19Q99542 508 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 NCAPGQ9BPX3 1015 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 CPSF3Q9UKF6 684 aaKnown RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 IL1RL1Q01638 556 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 OCRLQ01968 901 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 RGS9BPQ6ZS82 235 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 LRRC34Q8IZ02 419 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 FBXO25Q8TCJ0 367 aa18.17■□□□□ 0.5
GABRB3-202ENST00000311550 XPO7Q9UIA9 1087 aaKnown RBP18.17■□□□□ 0.5
GABRB3-202ENST00000311550 CYP4A22Q5TCH4 519 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 GPAT2Q6NUI2 795 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 CDR2LQ86X02 465 aaPredicted RBP18.16■□□□□ 0.5
GABRB3-202ENST00000311550 GLIS3Q8NEA6 775 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 RAPGEF5Q92565 580 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 TLR10Q9BXR5 811 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 RIC1Q4ADV7 1423 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 CCT8L1PA6NM43 557 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 PPFIA2O75334 1257 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 TYK2P29597 1187 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 APOBEC3FQ8IUX4 373 aaKnown RBP18.16■□□□□ 0.5
GABRB3-202ENST00000311550 LRRC71Q8N4P6 559 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 SLC24A3Q9HC58 644 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 MARCOQ9UEW3 520 aaPredicted RBP18.16■□□□□ 0.5
GABRB3-202ENST00000311550 SMG5Q9UPR3 1016 aaKnown RBP18.16■□□□□ 0.5
GABRB3-202ENST00000311550 KIAA0391O15091 583 aaKnown RBP18.16■□□□□ 0.5
GABRB3-202ENST00000311550 MOXD1Q6UVY6 613 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 UBN1Q9NPG3 1134 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 SLC12A6Q9UHW9 1150 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 IGSF9BQ9UPX0 1349 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 BCL9O00512 1426 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 CAND2O75155 1236 aa18.16■□□□□ 0.5
GABRB3-202ENST00000311550 TXNP10599 105 aaKnown RBP18.16■□□□□ 0.5
GABRB3-202ENST00000311550 BRD2P25440 801 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms