RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SMRP1Q8NCR6 262 aa19.53■□□□□ 0.72
SNRPA1-201ENST00000254193 SAAL1Q96ER3 474 aa19.53■□□□□ 0.72
SNRPA1-201ENST00000254193 FAM213AQ9BRX8 229 aa19.53■□□□□ 0.72
SNRPA1-201ENST00000254193 PCIF1Q9H4Z3 704 aa19.53■□□□□ 0.72
SNRPA1-201ENST00000254193 SLC39A2Q9NP94 309 aa19.53■□□□□ 0.72
SNRPA1-201ENST00000254193 CIZ1Q9ULV3 898 aaPredicted RBP19.53■□□□□ 0.72
SNRPA1-201ENST00000254193 XIRP2A4UGR9 3374 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 GOLGA8IPA6NC78 632 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 GOLGA6L4A6NEF3 574 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 GOLGA8JA6NMD2 632 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 TULP1O00294 542 aaPredicted RBP19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 EIF3DO15371 548 aaKnown RBP eCLIP19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 ZNF202O95125 648 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 NFICP08651 508 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 GARTP22102 1010 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 CLCN4P51793 760 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 JADE1Q6IE81 842 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 KRBA2Q6ZNG9 492 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 PPFIBP1Q86W92 1011 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 GLYCTKQ8IVS8 523 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 CD302Q8IX05 232 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 NELFCDQ8IXH7 590 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 GPR65Q8IYL9 337 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 C12orf76Q8N812 135 aaPredicted RBP19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 ZNF507Q8TCN5 953 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 SCFD1Q8WVM8 642 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 S1PR5Q9H228 398 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 UBQLN1Q9UMX0 589 aaKnown RBP19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 FAM50BQ9Y247 325 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 USP15Q9Y4E8 981 aaPredicted RBP19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 ATG2AQ2TAZ0 1938 aa19.52■□□□□ 0.72
SNRPA1-201ENST00000254193 SPTBN5Q9NRC6 3674 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 TRAPPC3O43617 180 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 ADH1AP07327 375 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 PRR29P0C7W0 189 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 HOXB8P17481 243 aaPredicted RBP19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 CYP3A5P20815 502 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 FGFR3P22607 806 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 SMAD2Q15796 467 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 KMT5BQ4FZB7 885 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 KANK3Q6NY19 840 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 ARMCX5Q6P1M9 558 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 LNX1Q8TBB1 728 aaPredicted RBP19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 NOC3LQ8WTT2 800 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 PIK3R5Q8WYR1 880 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 EXOC1Q9NV70 894 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 NUB1Q9Y5A7 615 aa19.51■□□□□ 0.71
SNRPA1-201ENST00000254193 TGFB1I1O43294 461 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 SPATA31D3P0C874 917 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 TKTP29401 623 aaKnown RBP19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 LRPAP1P30533 357 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 WNT7BP56706 349 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 STK4Q13043 487 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 TMEM132DQ14C87 1099 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 PSMD5Q16401 504 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 SPATA1Q5VX52 437 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 SPATA31D4Q6ZUB0 917 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 PALB2Q86YC2 1186 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 FBXL18Q96ME1 805 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 TSPAN18Q96SJ8 248 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 ASB7Q9H672 318 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 FNIP2Q9P278 1114 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 CDH22Q9UJ99 828 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 TTC28Q96AY4 2481 aa19.5■□□□□ 0.71
SNRPA1-201ENST00000254193 PPEF2O14830 753 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 ADAM12O43184 909 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 XPOTO43592 962 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 EXTL3O43909 919 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 LDHAP00338 332 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 RPN1P04843 607 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 MYL1P05976 194 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 POU5F1Q01860 360 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 RARS2Q5T160 578 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 BEST2Q8NFU1 509 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 CLSTN3Q9BQT9 956 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 CD320Q9NPF0 282 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 DZANK1Q9NVP4 752 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 DERAQ9Y315 318 aa19.49■□□□□ 0.71
SNRPA1-201ENST00000254193 MYH11P35749 1972 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 GLUD1P00367 558 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 WEE2P0C1S8 567 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 MCM4P33991 863 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 CREMQ03060 361 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 DPYDQ12882 1025 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 BMT2Q1RMZ1 405 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 BRSK2Q8IWQ3 736 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 FMR1NBQ8N0W7 255 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 GPD1LQ8N335 351 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 KIAA0895Q8NCT3 520 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 FEZF2Q8TBJ5 459 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 SUSD6Q92537 303 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 MAN1C1Q9NR34 630 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 AGPAT3Q9NRZ7 376 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 RBAKQ9NYW8 714 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 HSPBP1Q9NZL4 362 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 C2CD2Q9Y426 696 aa19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-201ENST00000254193 UBE4BO95155 1302 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms