RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 GJA1P17302 382 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 PTPN2P17706 415 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 XBP1P17861 261 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 GDI1P31150 447 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 ELF1P32519 619 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 DMWDQ09019 674 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 ST3GAL1Q11201 340 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 FAM78AQ5JUQ0 283 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 HEATR6Q6AI08 1181 aaKnown RBP15.18■□□□□ 0.02
DDX39A-201ENST00000242776 GPIHBP1Q8IV16 184 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 NSUN7Q8NE18 718 aaKnown RBP15.18■□□□□ 0.02
DDX39A-201ENST00000242776 FAM3CQ92520 227 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 WASF1Q92558 559 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 ELSPBP1Q96BH3 223 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 BORCS6Q96GS4 357 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 ADPGKQ9BRR6 497 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 KIFC3Q9BVG8 833 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 RALYQ9UKM9 306 aaKnown RBP15.18■□□□□ 0.02
DDX39A-201ENST00000242776 SMC3Q9UQE7 1217 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 ZMYM2Q9UBW7 1377 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 WNT7AO00755 349 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 GDF9O60383 454 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 FCARP24071 287 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 VIPR2P41587 438 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 SATB1Q01826 763 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 ROR1Q01973 937 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 HS6ST3Q8IZP7 471 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 FAM184AQ8NB25 1140 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 C3orf58Q8NDZ4 430 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 TRMT61BQ9BVS5 477 aaKnown RBP15.17■□□□□ 0.02
DDX39A-201ENST00000242776 FZD8Q9H461 694 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 CYP4F11Q9HBI6 524 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 ZFP14Q9HCL3 533 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 GDE1Q9NZC3 331 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 COL4A2P08572 1712 aa15.17■□□□□ 0.02
DDX39A-201ENST00000242776 CHD8Q9HCK8 2581 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 CHURC1-FNTBB4DL54 471 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 LYPLA2O95372 231 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 KRT2P35908 639 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 CCR2P41597 374 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 FNTBP49356 437 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 OSTNP61366 133 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 SIM2Q14190 667 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-201ENST00000242776 MAPK6Q16659 721 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 LAIR1Q6GTX8 287 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 CD300LGQ6UXG3 332 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 ANKS3Q6ZW76 656 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 DEPTORQ8TB45 409 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 PRIMPOLQ96LW4 560 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 ZSWIM3Q96MP5 696 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 CHRDQ9H2X0 955 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 ORC3Q9UBD5 711 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-201ENST00000242776 PIAS3Q9Y6X2 628 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 SDK1Q7Z5N4 2213 aa15.16■□□□□ 0.02
DDX39A-201ENST00000242776 WDR27A2RRH5 827 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 MAN2B1O00754 1011 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 CTDNEP1O95476 244 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 SEC24AO95486 1093 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 POU2F2P09086 479 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 MYL4P12829 197 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 TDGF1P13385 188 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 CCNE1P24864 410 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 HOXC13P31276 330 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 NRLP54845 237 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 PRSS36Q5K4E3 855 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 CDCA2Q69YH5 1023 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-201ENST00000242776 VITQ6UXI7 678 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 PDZD4Q76G19 769 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-201ENST00000242776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-201ENST00000242776 TTC8Q8TAM2 541 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 DNASE1L2Q92874 299 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 FAM126AQ9BYI3 521 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-201ENST00000242776 ZNF334Q9HCZ1 680 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-201ENST00000242776 RBM12Q9NTZ6 932 aaKnown RBP15.15■□□□□ 0.02
DDX39A-201ENST00000242776 KIF26AQ9ULI4 1882 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-201ENST00000242776 CACNA1GO43497 2377 aa15.15■□□□□ 0.02
DDX39A-201ENST00000242776 NEMFO60524 1076 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 JAK2O60674 1132 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 GJB2P29033 226 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 CCR3P51677 355 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 SOX4Q06945 474 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-201ENST00000242776 PPP2R5DQ14738 602 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 CCDC6Q16204 474 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 UPP1Q16831 310 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 FAM187BQ17R55 369 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 PRR23CQ6ZRP0 262 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 FAM177A1Q8N128 213 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-201ENST00000242776 ZNF687Q8N1G0 1237 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 CELF5Q8N6W0 485 aaKnown RBP15.14■□□□□ 0.01
DDX39A-201ENST00000242776 CEP120Q8N960 986 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 NETO1Q8TDF5 533 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 PPP1R10Q96QC0 940 aaKnown RBP15.14■□□□□ 0.01
DDX39A-201ENST00000242776 C2orf40Q9H1Z8 148 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 SEMA4GQ9NTN9 838 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 BACE2Q9Y5Z0 518 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 ZFHX4Q86UP3 3567 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 NCANO14594 1321 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 SLC30A4O14863 429 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 HRO43593 1189 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms