RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ZNF699Q32M78 642 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 SNX31Q8N9S9 440 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 C19orf18Q8NEA5 215 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 MASTLQ96GX5 879 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 APPL1Q9UKG1 709 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 COL4A3BPQ9Y5P4 624 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 ASXL2Q76L83 1435 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 C1orf232A0A0U1RR37 186 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 E7EWF7 191 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 CLDN3O15551 220 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 BAIAP3O94812 1187 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 TP53BP2Q13625 1128 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 TRPM8Q7Z2W7 1104 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 CHSY1Q86X52 802 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 JADE3Q92613 823 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 RSPH9Q9H1X1 276 aaPredicted RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 ZNF556Q9HAH1 456 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 GCNT4Q9P109 453 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 AP4S1Q9Y587 144 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 MRPL42Q9Y6G3 142 aaKnown RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 KIZQ2M2Z5 673 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 ADAM33Q9BZ11 813 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 DKK3Q9UBP4 350 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 AMHR2Q16671 573 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 ARHGAP15Q53QZ3 475 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 SMARCAD1Q9H4L7 1026 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 SEL1LQ9UBV2 794 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 AIM2O14862 343 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 TRIM24O15164 1050 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 ENO2P09104 434 aaPredicted RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 CDH2P19022 906 aaPredicted RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 PHKA1P46020 1223 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 CORO7P57737 925 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 ARF5P84085 180 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 PTGDRQ13258 359 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 Q4G0T1 1027 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 PANX2Q96RD6 677 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 PIGSQ96S52 555 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 FAM45BPQ6NSW5 357 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 ZBTB38Q8NAP3 1195 aaPredicted RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 ERP27Q96DN0 273 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 HOXC10Q9NYD6 342 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 SERPINB13Q9UIV8 391 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 USP15Q9Y4E8 981 aaPredicted RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 ABCC4O15439 1325 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 AHCYL1O43865 530 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 THPOP40225 353 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 GPR1P46091 355 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 COG2Q14746 738 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 RCN1Q15293 331 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 STX12Q86Y82 276 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 LRRC49Q8IUZ0 686 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 DIS3LQ8TF46 1054 aaKnown RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 LARP4BQ92615 738 aaKnown RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 OTUB1Q96FW1 271 aaPredicted RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 CATSPER2Q96P56 530 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 WWP1Q9H0M0 922 aa11.64□□□□□ -0.55
MSH6-201ENST00000234420 MARCOQ9UEW3 520 aaPredicted RBP11.64□□□□□ -0.55
MSH6-201ENST00000234420 CCDC188H7C350 402 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 TNFRSF21O75509 655 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ADARP55265 1226 aaKnown RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 TRIM45Q9H8W5 580 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 MRPL47Q9HD33 250 aaKnown RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 MAN1B1Q9UKM7 699 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 DTNAQ9Y4J8 743 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 MAP3K15Q6ZN16 1313 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 FAM47E-STBD1D6RA91 191 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ANGPT2O15123 496 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 SMNDC1O75940 238 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSH6-201ENST00000234420 CHN1P15882 459 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 MZF1P28698 734 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 MTMR2Q13614 643 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 KYNUQ16719 465 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 CEP68Q76N32 757 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 P3H2Q8IVL5 708 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 SH3RF3Q8TEJ3 882 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 VPS50Q96JG6 964 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 FAM210AQ96ND0 272 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 DEPDC7Q96QD5 511 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ZNF302Q9NR11 478 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ZFATQ9P243 1243 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 HDAC6Q9UBN7 1215 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 CNOT7Q9UIV1 285 aaKnown RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 LSM7Q9UK45 103 aaKnown RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 RGS20O76081 388 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ARMC3Q5W041 872 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 SARM1Q6SZW1 724 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 WDR60Q8WVS4 1066 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 AGAP3Q96P47 875 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 GRIN3BO60391 1043 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 CYP7B1O75881 506 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 CLUP10909 449 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 YWHABP31946 246 aaKnown RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 ZNF235Q14590 738 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 KLHL38Q2WGJ6 581 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms