RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Ccp110Q7TSH4 1004 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 C2cd2lQ80X80 706 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 DlatQ8BMF4 642 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Prr33Q8C494 260 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 ImmtQ8CAQ8 757 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Agfg1Q8K2K6 561 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Casc3Q8K3W3 698 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Zdhhc1Q8R0N9 484 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Eif3cQ8R1B4 911 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Q91WD4 421 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Creb3l3Q91XE9 479 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pcdha2Q91Y17 948 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Slc13a3Q91Y63 600 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 TardbpQ921F2 414 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 BniplQ99JU7 328 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Zmat2Q9CPW7 199 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Snx2Q9CWK8 519 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ssu72Q9CY97 194 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tubgcp4Q9D4F8 667 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Exoc2Q9D4H1 924 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 NosipQ9D6T0 301 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Snx5Q9D8U8 404 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tekt1Q9DAJ2 418 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Dpf1Q9QX66 387 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pbrm1Q8BSQ9 1634 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Grin2aP35436 1464 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ncoa3O09000 1398 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Hecw1Q8K4P8 1604 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ttll6A4Q9E8 822 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Hsbp1l1B2RXB2 72 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 TpteG5E8H5 664 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Top6blJ3QMY9 579 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gm21976J3QNN2 249 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 NfkbieO54910 364 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 NppaP05125 152 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 ThbdP15306 577 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Cd9P40240 226 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gpr182P43142 395 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Alox5P48999 674 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Senp1P59110 640 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Mcm2P97310 904 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Snai1Q02085 264 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ccdc162pQ0VG85 912 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Trim63Q38HM4 350 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Micall2Q3TN34 1009 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Rasip1Q3U0S6 961 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Mars2Q499X9 586 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Krt32Q62168 407 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Trim21Q62191 470 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tfe3Q64092 572 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ctnna3Q65CL1 895 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Fam167aQ6P1G6 215 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Casc4Q6P2L7 435 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 DstykQ6XUX1 927 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Maco1Q7TQE6 664 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Bpifb3Q80ZU7 473 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Bmp3Q8BHE5 468 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Kbtbd11Q8BNW9 633 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 PreplQ8C167 725 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Rbm14Q8C2Q3 669 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 FlcnQ8QZS3 579 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Brd8Q8R3B7 951 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Rufy2Q8R4C2 606 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Elac1Q8VEB6 362 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 HgsQ99LI8 775 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Chd1lQ9CXF7 900 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Rpl11Q9CXW4 178 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Coro7Q9D2V7 922 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gcc1Q9D4H2 778 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tbc1d20Q9D9I4 402 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Q9DAR0 182 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Cnn3Q9DAW9 330 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Rsc1a1Q9ER99 582 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 MefvQ9JJ26 767 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 PhaxQ9JJT9 385 aaKnown RBP5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Cabp1Q9JLK7 227 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Slc7a5Q9Z127 512 aa5.55□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pola1P33609 1465 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Itsn2Q9Z0R6 1659 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Atf7ipQ7TT18 1306 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 AV320801A2AWL3 467 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Jakmip2D3YXK0 820 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Olfr220E9Q050 325 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Oas2E9Q9A9 742 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gm9857F7CXR1 130 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gm15023L7MUB4 467 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Casq1O09165 405 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pold2O35654 469 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Bcat2O35855 393 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 PahP16331 453 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 FshrP35378 692 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gdi1P50396 447 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Cacnb3P54285 484 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Mtf2Q02395 593 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ccdc138Q0VF22 680 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Psd3Q2PFD7 1037 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 LbrQ3U9G9 626 aaKnown RBP5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ccdc33Q3ULW6 985 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 Trim80Q3V061 624 aa5.54□□□□□ -1.52
Clk1-201ENSMUST00000034868 ArhgdibQ61599 200 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms