RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C PST1Q12355 444 aa3.7□□□□□ -1.82
VHS3YOR054C FAB1P34756 2278 aa3.7□□□□□ -1.82
VHS3YOR054C MSW1P04803 379 aa3.7□□□□□ -1.82
VHS3YOR054C NHP6AP11632 93 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C SLM5P25345 492 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C PUT3P25502 979 aaPredicted RBP3.7□□□□□ -1.82
VHS3YOR054C LRE1P25579 583 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C CNE1P27825 502 aa3.7□□□□□ -1.82
VHS3YOR054C MKK2P32491 506 aa3.7□□□□□ -1.82
VHS3YOR054C YCR087C-AP37263 153 aa3.7□□□□□ -1.82
VHS3YOR054C REG2P38232 338 aa3.7□□□□□ -1.82
VHS3YOR054C FMO1P38866 432 aa3.7□□□□□ -1.82
VHS3YOR054C YHR177WP38867 453 aa3.7□□□□□ -1.82
VHS3YOR054C PFS1P38872 237 aa3.7□□□□□ -1.82
VHS3YOR054C IRC22P40006 225 aa3.7□□□□□ -1.82
VHS3YOR054C GIP2P40036 548 aa3.7□□□□□ -1.82
VHS3YOR054C NSA2P40078 261 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C AVT7P40501 490 aa3.7□□□□□ -1.82
VHS3YOR054C MIC26P50087 233 aa3.7□□□□□ -1.82
VHS3YOR054C THG1P53215 237 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C YGR035CP53222 116 aa3.7□□□□□ -1.82
VHS3YOR054C SMM1P53720 384 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C ACT1P60010 375 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C SKO1Q02100 647 aa3.7□□□□□ -1.82
VHS3YOR054C YML018CQ03730 393 aa3.7□□□□□ -1.82
VHS3YOR054C ADH6Q04894 360 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C YML053CQ04978 212 aa3.7□□□□□ -1.82
VHS3YOR054C YLR456WQ06199 204 aa3.7□□□□□ -1.82
VHS3YOR054C MCH1Q07376 486 aa3.7□□□□□ -1.82
VHS3YOR054C PAU23Q07987 124 aa3.7□□□□□ -1.82
VHS3YOR054C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
VHS3YOR054C YOR385WQ08909 290 aa3.7□□□□□ -1.82
VHS3YOR054C LEA1Q08963 238 aaPredicted RBP3.7□□□□□ -1.82
VHS3YOR054C FRE7Q12333 620 aa3.7□□□□□ -1.82
VHS3YOR054C PAU17Q12370 124 aa3.7□□□□□ -1.82
VHS3YOR054C SWM1Q12379 170 aa3.7□□□□□ -1.82
VHS3YOR054C YOR304C-AO14468 76 aa3.69□□□□□ -1.82
VHS3YOR054C TDH2P00358 332 aaKnown RBP3.69□□□□□ -1.82
VHS3YOR054C TPI1P00942 248 aaKnown RBP3.69□□□□□ -1.82
VHS3YOR054C ADK1P07170 222 aaKnown RBP3.69□□□□□ -1.82
VHS3YOR054C MSF1P08425 469 aa3.69□□□□□ -1.82
VHS3YOR054C TY2A-LR1P0C2J4 438 aa3.69□□□□□ -1.82
VHS3YOR054C TY2A-CP25383 438 aa3.69□□□□□ -1.82
VHS3YOR054C FUB1P25659 250 aa3.69□□□□□ -1.82
VHS3YOR054C HMX1P32339 317 aa3.69□□□□□ -1.82
VHS3YOR054C PAU2P32612 120 aa3.69□□□□□ -1.82
VHS3YOR054C UTR5P32630 166 aa3.69□□□□□ -1.82
VHS3YOR054C ALK2P32789 676 aaPredicted RBP3.69□□□□□ -1.82
VHS3YOR054C LSM2P38203 95 aaKnown RBP3.69□□□□□ -1.82
VHS3YOR054C PHO88P38264 188 aaPredicted RBP3.69□□□□□ -1.82
VHS3YOR054C TRS20P38334 175 aa3.69□□□□□ -1.82
VHS3YOR054C EAF5P39995 279 aa3.69□□□□□ -1.82
VHS3YOR054C PAU5P43575 122 aa3.69□□□□□ -1.82
VHS3YOR054C YGL262WP53054 175 aa3.69□□□□□ -1.82
VHS3YOR054C YGR066CP53242 292 aa3.69□□□□□ -1.82
VHS3YOR054C YGR079WP53249 370 aa3.69□□□□□ -1.82
VHS3YOR054C YNR040WP53736 256 aa3.69□□□□□ -1.82
VHS3YOR054C TEX1P53851 422 aaKnown RBP3.69□□□□□ -1.82
VHS3YOR054C TGL2P54857 326 aa3.69□□□□□ -1.82
VHS3YOR054C TY2A-DR2Q03483 438 aa3.69□□□□□ -1.82
VHS3YOR054C YDR444WQ04093 687 aa3.69□□□□□ -1.82
VHS3YOR054C ARA2Q04212 335 aa3.69□□□□□ -1.82
VHS3YOR054C NMA1Q06178 401 aaKnown RBP3.69□□□□□ -1.82
VHS3YOR054C CNL1Q06333 122 aa3.69□□□□□ -1.82
VHS3YOR054C YLR030WQ07967 263 aa3.69□□□□□ -1.82
VHS3YOR054C SRL2Q12020 392 aa3.69□□□□□ -1.82
VHS3YOR054C TY2A-BQ12260 438 aa3.69□□□□□ -1.82
VHS3YOR054C TY2A-OR2Q12293 438 aa3.69□□□□□ -1.82
VHS3YOR054C TY2A-DR1Q12392 438 aa3.69□□□□□ -1.82
VHS3YOR054C TY2A-OR1Q12439 438 aa3.69□□□□□ -1.82
VHS3YOR054C LAS17Q12446 633 aa3.69□□□□□ -1.82
VHS3YOR054C PAR32Q12515 295 aaKnown RBP3.69□□□□□ -1.82
VHS3YOR054C YLR146W-AQ2V2P1 62 aa3.69□□□□□ -1.82
VHS3YOR054C TY2A-DR3Q99303 438 aa3.69□□□□□ -1.82
VHS3YOR054C BGL2P15703 313 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C AIM17P23180 465 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C YMC1P32331 307 aa3.68□□□□□ -1.82
VHS3YOR054C MCR1P36060 302 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C PAN3P36102 679 aaPredicted RBP3.68□□□□□ -1.82
VHS3YOR054C AGP2P38090 596 aa3.68□□□□□ -1.82
VHS3YOR054C YHL044WP38727 235 aa3.68□□□□□ -1.82
VHS3YOR054C HMF1P40037 129 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C RMD9P53140 646 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C NPY1P53164 384 aa3.68□□□□□ -1.82
VHS3YOR054C ROY1Q04847 553 aa3.68□□□□□ -1.82
VHS3YOR054C NDD1Q08887 554 aa3.68□□□□□ -1.82
VHS3YOR054C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
VHS3YOR054C YCT1Q12235 531 aa3.68□□□□□ -1.82
VHS3YOR054C PRR2Q12310 699 aa3.68□□□□□ -1.82
VHS3YOR054C CYC7P00045 113 aa3.68□□□□□ -1.82
VHS3YOR054C MES1P00958 751 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C NOP1P15646 327 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C TKL1P23254 680 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C CWP1P28319 239 aa3.68□□□□□ -1.82
VHS3YOR054C ERG24P32462 438 aaKnown RBP3.68□□□□□ -1.82
VHS3YOR054C PMU1P36069 295 aa3.68□□□□□ -1.82
VHS3YOR054C QDR3P38227 689 aa3.68□□□□□ -1.82
VHS3YOR054C YBR071WP38243 211 aa3.68□□□□□ -1.82
VHS3YOR054C TRR2P38816 342 aa3.68□□□□□ -1.82
VHS3YOR054C RIB4P50861 169 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms