RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W ERG13P54839 491 aaKnown RBP6□□□□□ -1.45
HDA1YNL021W ARC18Q05933 178 aaKnown RBP6□□□□□ -1.45
HDA1YNL021W YPR064WQ12492 139 aa6□□□□□ -1.45
HDA1YNL021W MRS3P10566 314 aa5.99□□□□□ -1.45
HDA1YNL021W BUB2P26448 306 aaPredicted RBP5.99□□□□□ -1.45
HDA1YNL021W PMT2P31382 759 aa5.99□□□□□ -1.45
HDA1YNL021W ATS1P31386 333 aa5.99□□□□□ -1.45
HDA1YNL021W TFC1P32367 649 aa5.99□□□□□ -1.45
HDA1YNL021W RPS1AP33442 255 aaKnown RBP5.99□□□□□ -1.45
HDA1YNL021W PTC1P35182 281 aa5.99□□□□□ -1.45
HDA1YNL021W JEN1P36035 616 aa5.99□□□□□ -1.45
HDA1YNL021W MIX23P38162 196 aa5.99□□□□□ -1.45
HDA1YNL021W COX15P40086 486 aa5.99□□□□□ -1.45
HDA1YNL021W RIO2P40160 425 aaKnown RBP5.99□□□□□ -1.45
HDA1YNL021W BMT5P40493 336 aa5.99□□□□□ -1.45
HDA1YNL021W OST1P41543 476 aaKnown RBP5.99□□□□□ -1.45
HDA1YNL021W IKS1P47042 667 aa5.99□□□□□ -1.45
HDA1YNL021W MIC26P50087 233 aa5.99□□□□□ -1.45
HDA1YNL021W FLC3P53121 802 aa5.99□□□□□ -1.45
HDA1YNL021W SHY1P53266 389 aa5.99□□□□□ -1.45
HDA1YNL021W HCH1P53834 153 aa5.99□□□□□ -1.45
HDA1YNL021W TDA1Q03533 586 aa5.99□□□□□ -1.45
HDA1YNL021W YPL199CQ08954 240 aa5.99□□□□□ -1.45
HDA1YNL021W PER33Q12144 273 aa5.99□□□□□ -1.45
HDA1YNL021W COS2P0CX12 379 aa5.99□□□□□ -1.45
HDA1YNL021W COS3P0CX13 379 aa5.99□□□□□ -1.45
HDA1YNL021W YIL024CP40543 189 aa5.99□□□□□ -1.45
HDA1YNL021W COS4P43542 379 aa5.99□□□□□ -1.45
HDA1YNL021W PEX10Q05568 337 aa5.99□□□□□ -1.45
HDA1YNL021W NSL1Q12143 216 aa5.99□□□□□ -1.45
HDA1YNL021W DCN1Q12395 269 aa5.99□□□□□ -1.45
HDA1YNL021W TIP20P33891 701 aa5.98□□□□□ -1.45
HDA1YNL021W YPS5P53057 165 aa5.98□□□□□ -1.45
HDA1YNL021W DYN3Q04949 312 aa5.98□□□□□ -1.45
HDA1YNL021W RIF2Q06208 395 aa5.98□□□□□ -1.45
HDA1YNL021W PRM4Q12498 284 aa5.98□□□□□ -1.45
HDA1YNL021W SAS5Q99314 248 aa5.98□□□□□ -1.45
HDA1YNL021W RPS14AP06367 137 aaKnown RBP5.98□□□□□ -1.45
HDA1YNL021W SPT3P06844 337 aa5.98□□□□□ -1.45
HDA1YNL021W MTC6P38849 526 aa5.98□□□□□ -1.45
HDA1YNL021W RPS14BP39516 138 aaKnown RBP5.98□□□□□ -1.45
HDA1YNL021W YIA6P40556 373 aa5.98□□□□□ -1.45
HDA1YNL021W PEX30Q06169 523 aa5.98□□□□□ -1.45
HDA1YNL021W YLR446WQ06204 433 aa5.98□□□□□ -1.45
HDA1YNL021W RPL23AP0CX41 137 aaKnown RBP5.97□□□□□ -1.45
HDA1YNL021W RPL23BP0CX42 137 aaKnown RBP5.97□□□□□ -1.45
HDA1YNL021W PHO80P20052 293 aa5.97□□□□□ -1.45
HDA1YNL021W HPM1P40481 377 aa5.97□□□□□ -1.45
HDA1YNL021W LCB3P47013 409 aa5.97□□□□□ -1.45
HDA1YNL021W MDV1P47025 714 aa5.97□□□□□ -1.45
HDA1YNL021W GOR1P53839 350 aa5.97□□□□□ -1.45
HDA1YNL021W TRM12Q04235 462 aa5.97□□□□□ -1.45
HDA1YNL021W YMR254CQ04838 102 aa5.97□□□□□ -1.45
HDA1YNL021W RPN8Q08723 338 aaKnown RBP5.97□□□□□ -1.45
HDA1YNL021W RSA1Q08932 381 aa5.97□□□□□ -1.45
HDA1YNL021W TAO3P40468 2376 aa5.97□□□□□ -1.45
HDA1YNL021W CYC3P06182 269 aa5.96□□□□□ -1.45
HDA1YNL021W RPL20AP0CX23 172 aaKnown RBP5.96□□□□□ -1.45
HDA1YNL021W RPL20BP0CX24 172 aaPredicted RBP5.96□□□□□ -1.45
HDA1YNL021W CBS2P14905 389 aa5.96□□□□□ -1.45
HDA1YNL021W CCA1P21269 546 aa5.96□□□□□ -1.45
HDA1YNL021W RCK1P38622 512 aa5.96□□□□□ -1.45
HDA1YNL021W IRC24P40580 263 aa5.96□□□□□ -1.45
HDA1YNL021W YJR149WP47177 404 aa5.96□□□□□ -1.45
HDA1YNL021W YGL204CP53089 101 aa5.96□□□□□ -1.45
HDA1YNL021W YNL140CP53910 189 aa5.96□□□□□ -1.45
HDA1YNL021W IMP4P53941 290 aaKnown RBP5.96□□□□□ -1.45
HDA1YNL021W ASI3P53983 676 aa5.96□□□□□ -1.45
HDA1YNL021W JLP1Q12358 412 aa5.96□□□□□ -1.45
HDA1YNL021W RPL16AP26784 199 aaKnown RBP5.96□□□□□ -1.46
HDA1YNL021W UTP11P34247 250 aaPredicted RBP5.96□□□□□ -1.46
HDA1YNL021W OAR1P35731 278 aa5.96□□□□□ -1.46
HDA1YNL021W CYC2P38909 366 aa5.96□□□□□ -1.46
HDA1YNL021W EMC4P53073 190 aa5.96□□□□□ -1.46
HDA1YNL021W TPC1P53257 314 aa5.96□□□□□ -1.46
HDA1YNL021W FYV6P53913 173 aa5.96□□□□□ -1.46
HDA1YNL021W YDR248CQ03786 193 aa5.96□□□□□ -1.46
HDA1YNL021W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
HDA1YNL021W ATX2Q12067 313 aa5.96□□□□□ -1.46
HDA1YNL021W YFL068WP0CX99 160 aa5.95□□□□□ -1.46
HDA1YNL021W YLL066W-AP0CY00 160 aa5.95□□□□□ -1.46
HDA1YNL021W YLL067W-AP0CY01 160 aa5.95□□□□□ -1.46
HDA1YNL021W FUN26P31381 517 aa5.95□□□□□ -1.46
HDA1YNL021W SSH1P38353 490 aaKnown RBP5.95□□□□□ -1.46
HDA1YNL021W SCS7Q03529 384 aa5.95□□□□□ -1.46
HDA1YNL021W MRX9Q07349 420 aaKnown RBP5.95□□□□□ -1.46
HDA1YNL021W COQ10Q08058 207 aa5.95□□□□□ -1.46
HDA1YNL021W YOR289WQ12012 251 aaPredicted RBP5.95□□□□□ -1.46
HDA1YNL021W URA6P15700 204 aa5.95□□□□□ -1.46
HDA1YNL021W FPR1P20081 114 aaKnown RBP5.95□□□□□ -1.46
HDA1YNL021W EPT1P22140 391 aa5.95□□□□□ -1.46
HDA1YNL021W YDR124WQ04608 324 aa5.95□□□□□ -1.46
HDA1YNL021W DPP1Q05521 289 aa5.95□□□□□ -1.46
HDA1YNL021W MMT2Q08970 484 aa5.95□□□□□ -1.46
HDA1YNL021W MCT1Q12283 360 aa5.95□□□□□ -1.46
HDA1YNL021W FOL3Q12676 427 aaPredicted RBP5.95□□□□□ -1.46
HDA1YNL021W CPA1P07258 411 aaKnown RBP5.94□□□□□ -1.46
HDA1YNL021W PDX3P38075 228 aaKnown RBP5.94□□□□□ -1.46
HDA1YNL021W GOS1P38736 223 aa5.94□□□□□ -1.46
HDA1YNL021W TIM17P39515 158 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 185.8 ms