RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W SLX9P53251 210 aaPredicted RBP1.76□□□□□ -2.13
PDP3YLR455W AAH1P53909 347 aa1.76□□□□□ -2.13
PDP3YLR455W GRH1Q04410 372 aaKnown RBP1.76□□□□□ -2.13
PDP3YLR455W ARV1Q06541 321 aa1.76□□□□□ -2.13
PDP3YLR455W DUR1,2P32528 1835 aaKnown RBP1.75□□□□□ -2.13
PDP3YLR455W TAD2P47058 250 aa1.75□□□□□ -2.13
PDP3YLR455W CAB4P53332 305 aa1.75□□□□□ -2.13
PDP3YLR455W COS6P53344 381 aa1.75□□□□□ -2.13
PDP3YLR455W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
PDP3YLR455W YOL019WQ08157 551 aa1.75□□□□□ -2.13
PDP3YLR455W NCB2Q92317 146 aa1.75□□□□□ -2.13
PDP3YLR455W RAD10P06838 210 aa1.74□□□□□ -2.13
PDP3YLR455W SNA3P14359 133 aa1.74□□□□□ -2.13
PDP3YLR455W MET16P18408 261 aaPredicted RBP1.74□□□□□ -2.13
PDP3YLR455W ECM13P38195 257 aa1.74□□□□□ -2.13
PDP3YLR455W YHL049CP38722 271 aa1.74□□□□□ -2.13
PDP3YLR455W DDI1P40087 428 aa1.74□□□□□ -2.13
PDP3YLR455W NIF3P53081 288 aa1.74□□□□□ -2.13
PDP3YLR455W ASI3P53983 676 aa1.74□□□□□ -2.13
PDP3YLR455W YMR166CQ03829 368 aa1.74□□□□□ -2.13
PDP3YLR455W YMR114CQ04471 368 aaKnown RBP1.74□□□□□ -2.13
PDP3YLR455W SNF8Q12483 233 aa1.74□□□□□ -2.13
PDP3YLR455W TAO3P40468 2376 aa1.74□□□□□ -2.13
PDP3YLR455W COX2P00410 251 aa1.73□□□□□ -2.13
PDP3YLR455W RAD3P06839 778 aa1.73□□□□□ -2.13
PDP3YLR455W SCO1P23833 295 aa1.73□□□□□ -2.13
PDP3YLR455W RNP1P32385 249 aa1.73□□□□□ -2.13
PDP3YLR455W DSN1P40568 576 aa1.73□□□□□ -2.13
PDP3YLR455W YAR1P46683 200 aa1.73□□□□□ -2.13
PDP3YLR455W GON7P46984 123 aa1.73□□□□□ -2.13
PDP3YLR455W YJL028WP47062 111 aa1.73□□□□□ -2.13
PDP3YLR455W DSK2P48510 373 aa1.73□□□□□ -2.13
PDP3YLR455W MDM34P53083 459 aa1.73□□□□□ -2.13
PDP3YLR455W SUE1Q06524 206 aa1.73□□□□□ -2.13
PDP3YLR455W RDS3Q06835 107 aaPredicted RBP1.73□□□□□ -2.13
PDP3YLR455W RRP36Q12481 300 aaPredicted RBP1.73□□□□□ -2.13
PDP3YLR455W RPL24AP04449 155 aaKnown RBP1.72□□□□□ -2.13
PDP3YLR455W YHL026CP38740 315 aa1.72□□□□□ -2.13
PDP3YLR455W RCY1P39531 840 aa1.72□□□□□ -2.13
PDP3YLR455W COA1P40452 197 aa1.72□□□□□ -2.13
PDP3YLR455W EMC2P47133 292 aaKnown RBP1.72□□□□□ -2.13
PDP3YLR455W MAL13P53338 473 aa1.72□□□□□ -2.13
PDP3YLR455W DCR2Q05924 578 aa1.72□□□□□ -2.13
PDP3YLR455W CTR3Q06686 241 aa1.72□□□□□ -2.13
PDP3YLR455W GEP5Q12393 293 aa1.72□□□□□ -2.13
PDP3YLR455W EMP46Q12396 444 aa1.72□□□□□ -2.13
PDP3YLR455W EMC6Q12431 108 aa1.72□□□□□ -2.13
PDP3YLR455W YPR117WQ06116 2489 aa1.72□□□□□ -2.13
PDP3YLR455W PDR18P53756 1333 aa1.71□□□□□ -2.14
PDP3YLR455W HIS1P00498 297 aaKnown RBP1.71□□□□□ -2.14
PDP3YLR455W SGA1P08019 549 aa1.71□□□□□ -2.14
PDP3YLR455W CCA1P21269 546 aa1.71□□□□□ -2.14
PDP3YLR455W SCM4P32564 187 aa1.71□□□□□ -2.14
PDP3YLR455W YUH1P35127 236 aa1.71□□□□□ -2.14
PDP3YLR455W MRPL37P36532 105 aa1.71□□□□□ -2.14
PDP3YLR455W MPP6P53725 186 aaPredicted RBP1.71□□□□□ -2.14
PDP3YLR455W PEX12Q04370 399 aa1.71□□□□□ -2.14
PDP3YLR455W INM2Q05533 292 aa1.71□□□□□ -2.14
PDP3YLR455W BOP2Q06150 570 aa1.71□□□□□ -2.14
PDP3YLR455W POX1P13711 748 aa1.7□□□□□ -2.14
PDP3YLR455W VPS3P23643 1011 aa1.7□□□□□ -2.14
PDP3YLR455W PHO88P38264 188 aaPredicted RBP1.7□□□□□ -2.14
PDP3YLR455W GRE3P38715 327 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
PDP3YLR455W THO1P40040 218 aaKnown RBP1.7□□□□□ -2.14
PDP3YLR455W ALG11P53954 548 aaKnown RBP1.7□□□□□ -2.14
PDP3YLR455W SLM2P53955 656 aa1.7□□□□□ -2.14
PDP3YLR455W RRN5Q02983 363 aa1.7□□□□□ -2.14
PDP3YLR455W RSM10Q03201 203 aa1.7□□□□□ -2.14
PDP3YLR455W EMI1Q04406 187 aa1.7□□□□□ -2.14
PDP3YLR455W PST1Q12355 444 aa1.7□□□□□ -2.14
PDP3YLR455W CWP1P28319 239 aa1.69□□□□□ -2.14
PDP3YLR455W NRG2P38082 220 aa1.69□□□□□ -2.14
PDP3YLR455W MAL32P38158 584 aa1.69□□□□□ -2.14
PDP3YLR455W HEK2P38199 381 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14 RIP-Chip
PDP3YLR455W PRS2P38620 318 aaKnown RBP1.69□□□□□ -2.14
PDP3YLR455W HMF1P40037 129 aaKnown RBP1.69□□□□□ -2.14
PDP3YLR455W RPL10P41805 221 aaKnown RBP1.69□□□□□ -2.14
PDP3YLR455W OST2P46964 130 aa1.69□□□□□ -2.14
PDP3YLR455W YJR012CP47087 207 aa1.69□□□□□ -2.14
PDP3YLR455W DAN1P47178 298 aa1.69□□□□□ -2.14
PDP3YLR455W NBP1P52919 319 aaPredicted RBP1.69□□□□□ -2.14
PDP3YLR455W MAL12P53341 584 aa1.69□□□□□ -2.14
PDP3YLR455W PEX10Q05568 337 aa1.69□□□□□ -2.14
PDP3YLR455W KAP95Q06142 861 aaKnown RBP1.69□□□□□ -2.14
PDP3YLR455W ECM29P38737 1868 aa1.69□□□□□ -2.14
PDP3YLR455W VPS13Q07878 3144 aa1.69□□□□□ -2.14
PDP3YLR455W POL30P15873 258 aaKnown RBP1.68□□□□□ -2.14
PDP3YLR455W RME1P32338 300 aaKnown RBP1.68□□□□□ -2.14
PDP3YLR455W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
PDP3YLR455W YOR062CP36025 268 aa1.68□□□□□ -2.14
PDP3YLR455W MRX3P38172 270 aa1.68□□□□□ -2.14
PDP3YLR455W FCY21P40039 528 aa1.68□□□□□ -2.14
PDP3YLR455W YER189WP40104 122 aa1.68□□□□□ -2.14
PDP3YLR455W MRH4P53166 561 aa1.68□□□□□ -2.14
PDP3YLR455W DAL82P21705 255 aa1.67□□□□□ -2.14
PDP3YLR455W EHD3P28817 500 aa1.67□□□□□ -2.14
PDP3YLR455W QRI5P32344 111 aa1.67□□□□□ -2.14
PDP3YLR455W EBS1Q03466 884 aaKnown RBP1.67□□□□□ -2.14
PDP3YLR455W OST6Q03723 332 aa1.67□□□□□ -2.14
PDP3YLR455W RRT8Q08219 342 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 129.6 ms