RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W EMI1Q04406 187 aa1.77□□□□□ -2.13
SEC28YIL076W BOL1Q3E793 110 aa1.77□□□□□ -2.13
SEC28YIL076W SAS5Q99314 248 aa1.77□□□□□ -2.13
SEC28YIL076W AYR1P40471 297 aa1.76□□□□□ -2.13
SEC28YIL076W INM2Q05533 292 aa1.76□□□□□ -2.13
SEC28YIL076W TEL1P38110 2787 aa1.76□□□□□ -2.13
SEC28YIL076W RPL4AP10664 362 aaKnown RBP1.75□□□□□ -2.13
SEC28YIL076W POX1P13711 748 aa1.75□□□□□ -2.13
SEC28YIL076W ECM13P38195 257 aa1.75□□□□□ -2.13
SEC28YIL076W RPL10P41805 221 aaKnown RBP1.75□□□□□ -2.13
SEC28YIL076W RPL4BP49626 362 aaKnown RBP1.75□□□□□ -2.13
SEC28YIL076W YNL260CP53846 198 aa1.75□□□□□ -2.13
SEC28YIL076W CDC14Q00684 551 aa1.75□□□□□ -2.13
SEC28YIL076W SPO19Q03029 223 aa1.75□□□□□ -2.13
SEC28YIL076W ECM29P38737 1868 aa1.75□□□□□ -2.13
SEC28YIL076W NUM1Q00402 2748 aa1.74□□□□□ -2.13
SEC28YIL076W FRS2P15625 503 aaKnown RBP1.74□□□□□ -2.13
SEC28YIL076W OPI1P21957 404 aa1.74□□□□□ -2.13
SEC28YIL076W HEK2P38199 381 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
SEC28YIL076W YHL049CP38722 271 aa1.74□□□□□ -2.13
SEC28YIL076W SLX9P53251 210 aaPredicted RBP1.74□□□□□ -2.13
SEC28YIL076W RSM10Q03201 203 aa1.74□□□□□ -2.13
SEC28YIL076W BCP1Q06338 283 aa1.74□□□□□ -2.13
SEC28YIL076W SLD7Q08457 257 aa1.74□□□□□ -2.13
SEC28YIL076W UBR2Q07963 1872 aa1.73□□□□□ -2.13
SEC28YIL076W RPP0P05317 312 aaKnown RBP1.73□□□□□ -2.13
SEC28YIL076W RPC40P07703 335 aaKnown RBP1.73□□□□□ -2.13
SEC28YIL076W SGA1P08019 549 aa1.73□□□□□ -2.13
SEC28YIL076W UGA1P17649 471 aa1.73□□□□□ -2.13
SEC28YIL076W POF1P25576 258 aa1.73□□□□□ -2.13
SEC28YIL076W GCD14P46959 383 aaPredicted RBP1.73□□□□□ -2.13
SEC28YIL076W NBP35P52920 328 aa1.73□□□□□ -2.13
SEC28YIL076W PNC1P53184 216 aaKnown RBP1.73□□□□□ -2.13
SEC28YIL076W SWS2P53937 143 aa1.73□□□□□ -2.13
SEC28YIL076W PER33Q12144 273 aa1.73□□□□□ -2.13
SEC28YIL076W MDY2Q12285 212 aa1.73□□□□□ -2.13
SEC28YIL076W YDR524C-BQ3E6R4 66 aa1.73□□□□□ -2.13
SEC28YIL076W MOT1P32333 1867 aa1.72□□□□□ -2.13
SEC28YIL076W PRM9P39551 298 aa1.72□□□□□ -2.13
SEC28YIL076W AAH1P53909 347 aa1.72□□□□□ -2.13
SEC28YIL076W MHT1Q12525 324 aa1.72□□□□□ -2.13
SEC28YIL076W SEN1Q00416 2231 aaKnown RBP1.72□□□□□ -2.13
SEC28YIL076W MYO1P08964 1928 aa1.72□□□□□ -2.13
SEC28YIL076W COQ1P18900 473 aa1.71□□□□□ -2.14
SEC28YIL076W CCA1P21269 546 aa1.71□□□□□ -2.14
SEC28YIL076W PHO88P38264 188 aaPredicted RBP1.71□□□□□ -2.14
SEC28YIL076W TIM21P53220 239 aa1.71□□□□□ -2.14
SEC28YIL076W DAD3P69850 94 aa1.71□□□□□ -2.14
SEC28YIL076W YMR321CQ04898 105 aa1.71□□□□□ -2.14
SEC28YIL076W ARV1Q06541 321 aa1.71□□□□□ -2.14
SEC28YIL076W FMP27Q06179 2628 aa1.71□□□□□ -2.14
SEC28YIL076W IRA2P19158 3079 aa1.71□□□□□ -2.14
SEC28YIL076W STF1P01098 86 aa1.7□□□□□ -2.14
SEC28YIL076W YSR3P23501 404 aa1.7□□□□□ -2.14
SEC28YIL076W CWP1P28319 239 aa1.7□□□□□ -2.14
SEC28YIL076W TVP23P38962 199 aa1.7□□□□□ -2.14
SEC28YIL076W YGL185CP53100 379 aa1.7□□□□□ -2.14
SEC28YIL076W YHB1P39676 399 aaKnown RBP1.69□□□□□ -2.14
SEC28YIL076W OST2P46964 130 aa1.69□□□□□ -2.14
SEC28YIL076W ERV41Q04651 352 aa1.69□□□□□ -2.14
SEC28YIL076W YPR011CQ12251 326 aa1.69□□□□□ -2.14
SEC28YIL076W YLR422WQ06409 1932 aa1.68□□□□□ -2.14
SEC28YIL076W RAS2P01120 322 aaKnown RBP1.68□□□□□ -2.14
SEC28YIL076W RME1P32338 300 aaKnown RBP1.68□□□□□ -2.14
SEC28YIL076W NCB2Q92317 146 aa1.68□□□□□ -2.14
SEC28YIL076W ACC1Q00955 2233 aaKnown RBP1.68□□□□□ -2.14
SEC28YIL076W SNA3P14359 133 aa1.67□□□□□ -2.14
SEC28YIL076W MEK1P24719 497 aaPredicted RBP1.67□□□□□ -2.14
SEC28YIL076W KRR1P25586 316 aaPredicted RBP1.67□□□□□ -2.14
SEC28YIL076W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SEC28YIL076W PEP8P40335 379 aa1.67□□□□□ -2.14
SEC28YIL076W LSB1P53281 241 aa1.67□□□□□ -2.14
SEC28YIL076W PEX10Q05568 337 aa1.67□□□□□ -2.14
SEC28YIL076W RIF1P29539 1916 aa1.66□□□□□ -2.14
SEC28YIL076W MAK31P23059 88 aa1.66□□□□□ -2.14
SEC28YIL076W TVP38P36164 337 aa1.66□□□□□ -2.14
SEC28YIL076W HSM3P38348 480 aa1.66□□□□□ -2.14
SEC28YIL076W MNT4P53745 580 aa1.66□□□□□ -2.14
SEC28YIL076W PRM15Q03262 622 aa1.66□□□□□ -2.14
SEC28YIL076W PDR18P53756 1333 aa1.66□□□□□ -2.14
SEC28YIL076W CDC7P06243 507 aa1.65□□□□□ -2.15
SEC28YIL076W YHR032W-AP0C5N6 59 aa1.65□□□□□ -2.15
SEC28YIL076W SEC22P22214 214 aa1.65□□□□□ -2.15
SEC28YIL076W PRS4P38063 326 aaPredicted RBP1.65□□□□□ -2.15
SEC28YIL076W HMF1P40037 129 aaKnown RBP1.65□□□□□ -2.15
SEC28YIL076W SMD3P43321 101 aaKnown RBP1.65□□□□□ -2.15
SEC28YIL076W CTR3Q06686 241 aa1.65□□□□□ -2.15
SEC28YIL076W RCN1P36054 211 aa1.64□□□□□ -2.15
SEC28YIL076W FMP33P46998 180 aa1.64□□□□□ -2.15
SEC28YIL076W ASI3P53983 676 aa1.64□□□□□ -2.15
SEC28YIL076W BBP1Q12365 385 aa1.64□□□□□ -2.15
SEC28YIL076W RPL40AP0CH08 128 aaKnown RBP1.63□□□□□ -2.15
SEC28YIL076W RPL40BP0CH09 128 aaKnown RBP1.63□□□□□ -2.15
SEC28YIL076W FBA1P14540 359 aaKnown RBP1.63□□□□□ -2.15
SEC28YIL076W RCY1P39531 840 aa1.63□□□□□ -2.15
SEC28YIL076W MRX5P47007 382 aa1.63□□□□□ -2.15
SEC28YIL076W EMP46Q12396 444 aa1.63□□□□□ -2.15
SEC28YIL076W FMP16Q12497 93 aa1.63□□□□□ -2.15
SEC28YIL076W YBL008W-AQ3E821 79 aa1.63□□□□□ -2.15
SEC28YIL076W IRA1P18963 3092 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms