RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SCL1P21243 252 aaKnown RBP1.67□□□□□ -2.14
LOC1YFR001W YUH1P35127 236 aa1.67□□□□□ -2.14
LOC1YFR001W RMR1P53060 241 aa1.67□□□□□ -2.14
LOC1YFR001W RHO3Q00245 231 aaKnown RBP1.67□□□□□ -2.14
LOC1YFR001W ATO3Q12359 275 aa1.67□□□□□ -2.14
LOC1YFR001W YHR127WP38833 243 aaKnown RBP1.66□□□□□ -2.14
LOC1YFR001W LSM4P40070 187 aaKnown RBP1.66□□□□□ -2.14
LOC1YFR001W JHD2P47156 728 aaPredicted RBP1.66□□□□□ -2.14
LOC1YFR001W MRPS8Q03799 155 aa1.66□□□□□ -2.14
LOC1YFR001W YPL257WQ08974 193 aa1.66□□□□□ -2.14
LOC1YFR001W IPP1P00817 287 aaKnown RBP1.65□□□□□ -2.15
LOC1YFR001W DSF1P0CX08 502 aa1.65□□□□□ -2.15
LOC1YFR001W YNR073CP0CX09 502 aa1.65□□□□□ -2.15
LOC1YFR001W TCP1P12612 559 aaKnown RBP1.65□□□□□ -2.15
LOC1YFR001W FBA1P14540 359 aaKnown RBP1.65□□□□□ -2.15
LOC1YFR001W ERD2P18414 219 aa1.65□□□□□ -2.15
LOC1YFR001W PEX4P29340 183 aa1.65□□□□□ -2.15
LOC1YFR001W VMA11P32842 164 aa1.65□□□□□ -2.15
LOC1YFR001W YKL075CP36083 450 aa1.65□□□□□ -2.15
LOC1YFR001W FIS1P40515 155 aa1.65□□□□□ -2.15
LOC1YFR001W BNA6P43619 295 aa1.65□□□□□ -2.15
LOC1YFR001W SEI1Q06058 285 aa1.65□□□□□ -2.15
LOC1YFR001W SIR4P11978 1358 aa1.64□□□□□ -2.15
LOC1YFR001W RPS5P26783 225 aaKnown RBP1.64□□□□□ -2.15
LOC1YFR001W MDH3P32419 343 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
LOC1YFR001W YPT52P36018 234 aaKnown RBP1.64□□□□□ -2.15
LOC1YFR001W HOC1P47124 396 aa1.64□□□□□ -2.15
LOC1YFR001W YJR079WP47126 109 aa1.64□□□□□ -2.15
LOC1YFR001W YGR219WP53307 113 aa1.64□□□□□ -2.15
LOC1YFR001W YNL134CP53912 376 aaKnown RBP1.64□□□□□ -2.15
LOC1YFR001W YLR173WQ06247 608 aa1.64□□□□□ -2.15
LOC1YFR001W PAM18Q07914 168 aa1.64□□□□□ -2.15
LOC1YFR001W ATG31Q12421 196 aa1.64□□□□□ -2.15
LOC1YFR001W YPL229WQ99395 206 aa1.64□□□□□ -2.15
LOC1YFR001W HTL1Q9URQ5 78 aa1.64□□□□□ -2.15
LOC1YFR001W INO80P53115 1489 aa1.63□□□□□ -2.15
LOC1YFR001W SNA3P14359 133 aa1.63□□□□□ -2.15
LOC1YFR001W PEP8P40335 379 aa1.63□□□□□ -2.15
LOC1YFR001W RPA43P46669 326 aa1.63□□□□□ -2.15
LOC1YFR001W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
LOC1YFR001W ATG39Q06159 398 aa1.63□□□□□ -2.15
LOC1YFR001W MSA1Q08471 629 aa1.63□□□□□ -2.15
LOC1YFR001W RPL9AP05738 191 aaKnown RBP1.62□□□□□ -2.15
LOC1YFR001W PHO88P38264 188 aaPredicted RBP1.62□□□□□ -2.15
LOC1YFR001W RPF1P38805 295 aaKnown RBP1.62□□□□□ -2.15
LOC1YFR001W CIS3P47001 227 aa1.62□□□□□ -2.15
LOC1YFR001W RPL9BP51401 191 aaKnown RBP1.62□□□□□ -2.15
LOC1YFR001W MRPL50P53724 139 aa1.62□□□□□ -2.15
LOC1YFR001W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
LOC1YFR001W NIP7Q08962 181 aaKnown RBP1.62□□□□□ -2.15
LOC1YFR001W MSW1P04803 379 aa1.61□□□□□ -2.15
LOC1YFR001W CDC7P06243 507 aa1.61□□□□□ -2.15
LOC1YFR001W GRX2P17695 143 aaKnown RBP1.61□□□□□ -2.15
LOC1YFR001W OAC1P32332 324 aa1.61□□□□□ -2.15
LOC1YFR001W YMR144WP40214 342 aaKnown RBP1.61□□□□□ -2.15
LOC1YFR001W CAT5P41735 233 aa1.61□□□□□ -2.15
LOC1YFR001W YJR056CP47115 236 aa1.61□□□□□ -2.15
LOC1YFR001W HAM1P47119 197 aaKnown RBP1.61□□□□□ -2.15
LOC1YFR001W ERG25P53045 309 aa1.61□□□□□ -2.15
LOC1YFR001W CYT2Q00873 224 aa1.61□□□□□ -2.15
LOC1YFR001W KRE28Q04431 385 aa1.61□□□□□ -2.15
LOC1YFR001W NEJ1Q06148 342 aa1.61□□□□□ -2.15
LOC1YFR001W ARR2Q06597 130 aa1.61□□□□□ -2.15
LOC1YFR001W HEM25Q07534 307 aa1.61□□□□□ -2.15
LOC1YFR001W YLR126CQ12288 251 aa1.61□□□□□ -2.15
LOC1YFR001W YOR020W-AQ3E824 90 aa1.61□□□□□ -2.15
LOC1YFR001W ERV15P38312 142 aa1.6□□□□□ -2.15
LOC1YFR001W YHR022CP38763 256 aa1.6□□□□□ -2.15
LOC1YFR001W YHR180WP38868 163 aa1.6□□□□□ -2.15
LOC1YFR001W YAR068WP39564 161 aa1.6□□□□□ -2.15
LOC1YFR001W BMT5P40493 336 aa1.6□□□□□ -2.15
LOC1YFR001W SRL4Q03085 281 aa1.6□□□□□ -2.15
LOC1YFR001W YHR139C-AO13536 103 aa1.59□□□□□ -2.15
LOC1YFR001W DDI2P0CH63 225 aa1.59□□□□□ -2.15
LOC1YFR001W DDI3P0CH64 225 aa1.59□□□□□ -2.15
LOC1YFR001W FCY2P17064 533 aa1.59□□□□□ -2.15
LOC1YFR001W ECM33P38248 429 aaKnown RBP1.59□□□□□ -2.15
LOC1YFR001W YKE4P40544 346 aa1.59□□□□□ -2.15
LOC1YFR001W YIL001WP40560 513 aa1.59□□□□□ -2.15
LOC1YFR001W ILM1P47155 203 aa1.59□□□□□ -2.15
LOC1YFR001W MED4Q12343 284 aa1.59□□□□□ -2.15
LOC1YFR001W MDH2P22133 377 aa1.58□□□□□ -2.16
LOC1YFR001W DSE2P38844 325 aa1.58□□□□□ -2.16
LOC1YFR001W FMC1P40491 155 aa1.58□□□□□ -2.16
LOC1YFR001W PRM10P42946 383 aa1.58□□□□□ -2.16
LOC1YFR001W USB1Q12208 290 aaKnown RBP1.58□□□□□ -2.16
LOC1YFR001W RPO26P20435 155 aa1.57□□□□□ -2.16
LOC1YFR001W RIB1P38066 345 aa1.57□□□□□ -2.16
LOC1YFR001W YBR063CP38083 404 aa1.57□□□□□ -2.16
LOC1YFR001W YER135CP40082 130 aa1.57□□□□□ -2.16
LOC1YFR001W YJR149WP47177 404 aa1.57□□□□□ -2.16
LOC1YFR001W RRN5Q02983 363 aa1.57□□□□□ -2.16
LOC1YFR001W YML096WQ04489 525 aa1.57□□□□□ -2.16
LOC1YFR001W TPO4Q12256 659 aa1.57□□□□□ -2.16
LOC1YFR001W DCN1Q12395 269 aa1.57□□□□□ -2.16
LOC1YFR001W MRPL25P23369 157 aa1.56□□□□□ -2.16
LOC1YFR001W LDB7P38210 180 aa1.56□□□□□ -2.16
LOC1YFR001W RSM25P40496 264 aa1.56□□□□□ -2.16
LOC1YFR001W MCM22P47167 239 aa1.56□□□□□ -2.16
LOC1YFR001W YNR062CP53748 327 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 85.1 ms