RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	FOL3	Q12676	427 aa	Predicted RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	YMR030W-A	Q3E760	96 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	MYO1	P08964	1928 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	ILV1	P00927	576 aa	Known RBP	4.15	□□□□□ -1.75
TFB3	YDR460W	YOL163W	P0CF20	169 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	SEC22	P22214	214 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	PPH21	P23594	369 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	PMI40	P29952	429 aa	Known RBP	4.15	□□□□□ -1.75
TFB3	YDR460W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
TFB3	YDR460W	COT1	P32798	439 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	YKL187C	P34231	750 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	UPS2	P35200	230 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	SRY1	P36007	326 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	PRY2	P36110	329 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	EHT1	P38295	451 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	SMB1	P40018	196 aa	Known RBP	4.15	□□□□□ -1.75
TFB3	YDR460W	FAU1	P40099	211 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	MPP6	P53725	186 aa	Predicted RBP	4.15	□□□□□ -1.75
TFB3	YDR460W	IBD2	P53892	351 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	YNL034W	P53963	612 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	YNL018C	P53976	612 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	YPL080C	Q02826	108 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	YPR114W	Q06107	315 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	MRPL35	Q06678	367 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	SHS1	Q07657	551 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	YPR027C	Q12079	277 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	SUL2	Q12325	893 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	PCL9	Q12477	304 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.15	□□□□□ -1.75
TFB3	YDR460W	ACC1	Q00955	2233 aa	Known RBP	4.15	□□□□□ -1.75
TFB3	YDR460W	RIF1	P29539	1916 aa		4.15	□□□□□ -1.75
TFB3	YDR460W	SAL1	D6W196	494 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	TDH2	P00358	332 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
TFB3	YDR460W	HIS1	P00498	297 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	CDC36	P06100	191 aa	Predicted RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	YPR170W-B	P0C5R9	85 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	POX1	P13711	748 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	HYP2	P23301	157 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	PEX34	P25584	144 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	PPA2	P28239	310 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	MDL1	P33310	695 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YKL102C	P34249	101 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	DRE2	P36152	348 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	FLO10	P36170	1169 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	ZTA1	P38230	334 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	YBR292C	P38357	123 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	DOG1	P38774	246 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YEA6	P39953	335 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	GDI1	P39958	451 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	ELO3	P40319	345 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	MOB1	P40484	314 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	FKH2	P41813	862 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	PAU5	P43575	122 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	IKS1	P47042	667 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	XPT1	P47165	209 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	SBH2	P52871	88 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YGL262W	P53054	175 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	PNC1	P53184	216 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	YIF1	P53845	314 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	HHT1	P61830	136 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	LEE1	Q02799	301 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	TMA23	Q03525	211 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YMR160W	Q03823	816 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	AIM33	Q04516	312 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YPR098C	Q06089	161 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YLR456W	Q06199	204 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YPR174C	Q06616	221 aa	Predicted RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	CTR3	Q06686	241 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	IRC10	Q08118	586 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YOR385W	Q08909	290 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YDR056C	Q12025	205 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	YLR049C	Q12110	428 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	RPL7B	Q12213	244 aa	Known RBP	4.14	□□□□□ -1.75
TFB3	YDR460W	IZH4	Q99393	312 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	FMP27	Q06179	2628 aa		4.14	□□□□□ -1.75
TFB3	YDR460W	COX3	P00420	269 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	RAS2	P01120	322 aa	Known RBP	4.13	□□□□□ -1.75
TFB3	YDR460W	PHO2	P07269	559 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	GAL7	P08431	366 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
TFB3	YDR460W	ADE1	P27616	306 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	GEX2	P36173	615 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	EFM1	P38732	585 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	HTD2	P38790	280 aa	Known RBP	4.13	□□□□□ -1.75
TFB3	YDR460W	YHR127W	P38833	243 aa	Known RBP	4.13	□□□□□ -1.75
TFB3	YDR460W	FMO1	P38866	432 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	YHR177W	P38867	453 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	SNU13	P39990	126 aa	Known RBP	4.13	□□□□□ -1.75
TFB3	YDR460W	GET2	P40056	285 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	IME4	P41833	600 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	STE24	P47154	453 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	MUP1	P50276	574 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	VHT1	P53241	593 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	RTT102	P53330	157 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	YNL260C	P53846	198 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	RNH201	P53942	307 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	DIA1	P54005	336 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	GIP3	Q03016	1276 aa		4.13	□□□□□ -1.75
TFB3	YDR460W	GAS3	Q03655	524 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms