RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C YHB1P39676 399 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C PRE6P40303 254 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C AVT7P40501 490 aa2.14□□□□□ -2.07
RTG3YBL103C YIL001WP40560 513 aa2.14□□□□□ -2.07
RTG3YBL103C SNZ3P43545 298 aa2.14□□□□□ -2.07
RTG3YBL103C BAT2P47176 376 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C DAN1P47178 298 aa2.14□□□□□ -2.07
RTG3YBL103C TRM9P49957 279 aa2.14□□□□□ -2.07
RTG3YBL103C NIF3P53081 288 aa2.14□□□□□ -2.07
RTG3YBL103C GET1P53192 235 aa2.14□□□□□ -2.07
RTG3YBL103C FAR8Q05040 523 aa2.14□□□□□ -2.07
RTG3YBL103C ATG17Q06410 417 aa2.14□□□□□ -2.07
RTG3YBL103C LOA1Q06508 300 aa2.14□□□□□ -2.07
RTG3YBL103C CMC2Q3E7A4 109 aa2.14□□□□□ -2.07
RTG3YBL103C IKI3Q06706 1349 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C RPL26AP05743 127 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C YKR104WP0CE69 306 aa2.14□□□□□ -2.07
RTG3YBL103C ATG15P25641 520 aa2.14□□□□□ -2.07
RTG3YBL103C ADE1P27616 306 aa2.14□□□□□ -2.07
RTG3YBL103C EHD3P28817 500 aa2.14□□□□□ -2.07
RTG3YBL103C ATP7P30902 174 aa2.14□□□□□ -2.07
RTG3YBL103C GDH2P33327 1092 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C NTF2P33331 125 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C GOS1P38736 223 aa2.14□□□□□ -2.07
RTG3YBL103C YHR127WP38833 243 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C IKI1P38874 309 aa2.14□□□□□ -2.07
RTG3YBL103C SEC72P39742 193 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C OST3P48439 350 aa2.14□□□□□ -2.07
RTG3YBL103C MIC26P50087 233 aa2.14□□□□□ -2.07
RTG3YBL103C RPL26BP53221 127 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C SNZ2P53824 298 aa2.14□□□□□ -2.07
RTG3YBL103C YMR114CQ04471 368 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C GIM5Q04493 163 aa2.14□□□□□ -2.07
RTG3YBL103C YPR147CQ06522 304 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C COQ10Q08058 207 aa2.14□□□□□ -2.07
RTG3YBL103C GRE1Q08969 168 aa2.14□□□□□ -2.07
RTG3YBL103C GPM2Q12008 311 aa2.14□□□□□ -2.07
RTG3YBL103C DCN1Q12395 269 aa2.14□□□□□ -2.07
RTG3YBL103C QCR7P00128 127 aa2.13□□□□□ -2.07
RTG3YBL103C YHL049CP38722 271 aa2.13□□□□□ -2.07
RTG3YBL103C TRM5P38793 499 aa2.13□□□□□ -2.07
RTG3YBL103C SUR2P38992 349 aa2.13□□□□□ -2.07
RTG3YBL103C MGA1P53050 456 aa2.13□□□□□ -2.07
RTG3YBL103C NSA1P53136 463 aaPredicted RBP2.13□□□□□ -2.07
RTG3YBL103C FMP41P53889 259 aaKnown RBP2.13□□□□□ -2.07
RTG3YBL103C SDC1Q03323 175 aa2.13□□□□□ -2.07
RTG3YBL103C GRH1Q04410 372 aaKnown RBP2.13□□□□□ -2.07
RTG3YBL103C SPG4Q04438 115 aa2.13□□□□□ -2.07
RTG3YBL103C YCL012CQ8J0M4 134 aa2.13□□□□□ -2.07
RTG3YBL103C TUS1Q06412 1307 aa2.12□□□□□ -2.07
RTG3YBL103C CAT2P32796 670 aaKnown RBP2.12□□□□□ -2.07
RTG3YBL103C POP8P38208 133 aa2.12□□□□□ -2.07
RTG3YBL103C YMR144WP40214 342 aaKnown RBP2.12□□□□□ -2.07
RTG3YBL103C BMT5P40493 336 aa2.12□□□□□ -2.07
RTG3YBL103C NUP57P48837 541 aa2.12□□□□□ -2.07
RTG3YBL103C EFM5P53200 248 aaKnown RBP2.12□□□□□ -2.07
RTG3YBL103C FCF1Q05498 189 aaPredicted RBP2.12□□□□□ -2.07
RTG3YBL103C FUS2Q05670 677 aa2.12□□□□□ -2.07
RTG3YBL103C COX5AP00424 153 aa2.11□□□□□ -2.07
RTG3YBL103C BCY1P07278 416 aaKnown RBP2.11□□□□□ -2.07
RTG3YBL103C FBA1P14540 359 aaKnown RBP2.11□□□□□ -2.07
RTG3YBL103C PRX1P34227 261 aaKnown RBP2.11□□□□□ -2.07
RTG3YBL103C YKL075CP36083 450 aa2.11□□□□□ -2.07
RTG3YBL103C MRPL39P36533 70 aa2.11□□□□□ -2.07
RTG3YBL103C EGD2P38879 174 aaKnown RBP2.11□□□□□ -2.07
RTG3YBL103C FYV6P53913 173 aa2.11□□□□□ -2.07
RTG3YBL103C SEI1Q06058 285 aa2.11□□□□□ -2.07
RTG3YBL103C RRP40Q08285 240 aaKnown RBP2.11□□□□□ -2.07
RTG3YBL103C URA6P15700 204 aa2.1□□□□□ -2.07
RTG3YBL103C DRE2P36152 348 aa2.1□□□□□ -2.07
RTG3YBL103C NRG2P38082 220 aa2.1□□□□□ -2.07
RTG3YBL103C PHO89P38361 574 aa2.1□□□□□ -2.07
RTG3YBL103C ERG10P41338 398 aaKnown RBP2.1□□□□□ -2.07
RTG3YBL103C RPE1P46969 238 aa2.1□□□□□ -2.07
RTG3YBL103C SLX9P53251 210 aaPredicted RBP2.1□□□□□ -2.07
RTG3YBL103C PRM15Q03262 622 aa2.1□□□□□ -2.07
RTG3YBL103C NUP157P40064 1391 aaKnown RBP2.1□□□□□ -2.07
RTG3YBL103C SPT3P06844 337 aa2.09□□□□□ -2.07
RTG3YBL103C DPM1P14020 267 aaKnown RBP2.09□□□□□ -2.07
RTG3YBL103C SNA3P14359 133 aa2.09□□□□□ -2.07
RTG3YBL103C SPS18P32572 300 aa2.09□□□□□ -2.07
RTG3YBL103C IRC18P47056 224 aa2.09□□□□□ -2.07
RTG3YBL103C MCM22P47167 239 aa2.09□□□□□ -2.07
RTG3YBL103C YJR149WP47177 404 aa2.09□□□□□ -2.07
RTG3YBL103C YGL159WP53110 370 aa2.09□□□□□ -2.07
RTG3YBL103C DRS2P39524 1355 aa2.08□□□□□ -2.08
RTG3YBL103C DBF2P22204 572 aa2.08□□□□□ -2.08
RTG3YBL103C DPB2P24482 689 aaPredicted RBP2.08□□□□□ -2.08
RTG3YBL103C VPS51P36116 164 aa2.08□□□□□ -2.08
RTG3YBL103C YCR087C-AP37263 153 aa2.08□□□□□ -2.08
RTG3YBL103C HMT1P38074 348 aa2.08□□□□□ -2.08
RTG3YBL103C GRE3P38715 327 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
RTG3YBL103C BRR6P53062 197 aa2.08□□□□□ -2.08
RTG3YBL103C MMS2P53152 137 aa2.08□□□□□ -2.08
RTG3YBL103C AAH1P53909 347 aa2.08□□□□□ -2.08
RTG3YBL103C GOT1Q03554 138 aa2.08□□□□□ -2.08
RTG3YBL103C YPL150WQ12152 901 aa2.08□□□□□ -2.08
RTG3YBL103C TPO4Q12256 659 aa2.08□□□□□ -2.08
RTG3YBL103C YHR086W-AQ3E746 53 aa2.08□□□□□ -2.08
RTG3YBL103C YBL008W-AQ3E821 79 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms