RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 TRAPPC3O43617 180 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 BRCC3P46736 316 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 ID4P47928 161 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 YARSP54577 528 aaKnown RBP20.84■□□□□ 0.93
SMN2-215ENST00000628696 STARD6P59095 220 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 NBR1Q14596 966 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 UPP1Q16831 310 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 PABPC1LQ4VXU2 614 aaKnown RBP20.84■□□□□ 0.93
SMN2-215ENST00000628696 ING5Q8WYH8 240 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 UROC1Q96N76 676 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 KXD1Q9BQD3 176 aa20.84■□□□□ 0.93
SMN2-215ENST00000628696 DDX19AQ9NUU7 478 aaKnown RBP20.84■□□□□ 0.93
SMN2-215ENST00000628696 NOL7Q9UMY1 257 aaKnown RBP20.84■□□□□ 0.93
SMN2-215ENST00000628696 SMIM28A0A1B0GU29 152 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 EIF5BO60841 1220 aaKnown RBP20.83■□□□□ 0.93
SMN2-215ENST00000628696 SP9P0CG40 484 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 GLULP15104 373 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 FXR2P51116 673 aaKnown RBP eCLIP20.83■□□□□ 0.93
SMN2-215ENST00000628696 PEX3P56589 373 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 SLC44A4Q53GD3 710 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 CD300LGQ6UXG3 332 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 ANKS3Q6ZW76 656 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 FAM184AQ8NB25 1140 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 FBXO18Q8NFZ0 1043 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 DDX27Q96GQ7 796 aaKnown RBP20.83■□□□□ 0.93
SMN2-215ENST00000628696 LLPHQ9BRT6 129 aaKnown RBP20.83■□□□□ 0.93
SMN2-215ENST00000628696 CCDC94Q9BW85 323 aaPredicted RBP20.83■□□□□ 0.93
SMN2-215ENST00000628696 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 TNFSF13BQ9Y275 285 aa20.83■□□□□ 0.93
SMN2-215ENST00000628696 MRPS23Q9Y3D9 190 aaKnown RBP20.83■□□□□ 0.93
SMN2-215ENST00000628696 KANSL1LA0AUZ9 987 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 SEC24BO95487 1268 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 UBXN2BQ14CS0 331 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 MLF2Q15773 248 aaPredicted RBP20.82■□□□□ 0.92
SMN2-215ENST00000628696 ZNF568Q3ZCX4 644 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 ZC3H14Q6PJT7 736 aaKnown RBP20.82■□□□□ 0.92
SMN2-215ENST00000628696 NPAS3Q8IXF0 933 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 C4orf32Q8N8J7 132 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 CEP120Q8N960 986 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 C3orf58Q8NDZ4 430 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 SNX29Q8TEQ0 813 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 MCRS1Q96EZ8 462 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 HINFPQ9BQA5 517 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 TOPORSQ9NS56 1045 aaPredicted RBP20.82■□□□□ 0.92
SMN2-215ENST00000628696 KCNH3Q9ULD8 1083 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 BACE2Q9Y5Z0 518 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 CITO14578 2027 aa20.82■□□□□ 0.92
SMN2-215ENST00000628696 COL4A3Q01955 1670 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 E9PMD0 336 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 POU2F2P09086 479 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 GRM5P41594 1212 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 NPTX2P47972 431 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 TRAPPC10P48553 1259 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 ARPP19P56211 112 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 SOX4Q06945 474 aaPredicted RBP20.81■□□□□ 0.92
SMN2-215ENST00000628696 ACO2Q99798 780 aaKnown RBP20.81■□□□□ 0.92
SMN2-215ENST00000628696 TCHPQ9BT92 498 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 MRPL4Q9BYD3 311 aaKnown RBP20.81■□□□□ 0.92
SMN2-215ENST00000628696 CDT1Q9H211 546 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 DAXXQ9UER7 740 aaPredicted RBP20.81■□□□□ 0.92
SMN2-215ENST00000628696 DNM3Q9UQ16 869 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 FANCMQ8IYD8 2048 aa20.81■□□□□ 0.92
SMN2-215ENST00000628696 RHOP08100 348 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 ELF1P32519 619 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 HMGN5P82970 282 aaKnown RBP20.8■□□□□ 0.92
SMN2-215ENST00000628696 PFKPQ01813 784 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 PRKCQQ04759 706 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 PTGDRQ13258 359 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 DMP1Q13316 513 aaPredicted RBP20.8■□□□□ 0.92
SMN2-215ENST00000628696 PDIA5Q14554 519 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 RTL10Q7L3V2 364 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 TARS2Q9BW92 718 aaKnown RBP20.8■□□□□ 0.92
SMN2-215ENST00000628696 BCO2Q9BYV7 579 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 RAB34Q9BZG1 259 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 KMT5AQ9NQR1 393 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 SLC38A7Q9NVC3 462 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 SPATA6Q9NWH7 488 aaPredicted RBP20.8■□□□□ 0.92
SMN2-215ENST00000628696 MTF2Q9Y483 593 aaPredicted RBP20.8■□□□□ 0.92
SMN2-215ENST00000628696 STK24Q9Y6E0 443 aa20.8■□□□□ 0.92
SMN2-215ENST00000628696 PHLPP2Q6ZVD8 1323 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 FAM170BA6NMN3 283 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 PODXLO00592 558 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 PRRG1O14668 218 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 HIP1RO75146 1068 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 LRG1P02750 347 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 HARSP12081 509 aaKnown RBP20.79■□□□□ 0.92
SMN2-215ENST00000628696 CD72P21854 359 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 ROR1Q01973 937 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 VARS2Q5ST30 1063 aaKnown RBP20.79■□□□□ 0.92
SMN2-215ENST00000628696 KIAA2013Q8IYS2 634 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 ZNF461Q8TAF7 563 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 ACAP3Q96P50 834 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 TMEM134Q9H6X4 195 aa20.79■□□□□ 0.92
SMN2-215ENST00000628696 MYH11P35749 1972 aa20.78■□□□□ 0.92
SMN2-215ENST00000628696 PP2D1A8MPX8 630 aa20.78■□□□□ 0.92
SMN2-215ENST00000628696 PTPN2P17706 415 aa20.78■□□□□ 0.92
SMN2-215ENST00000628696 SLC5A9Q2M3M2 681 aa20.78■□□□□ 0.92
SMN2-215ENST00000628696 XKR4Q5GH76 650 aa20.78■□□□□ 0.92
SMN2-215ENST00000628696 KRT79Q5XKE5 535 aa20.78■□□□□ 0.92
SMN2-215ENST00000628696 ALKAL1Q6UXT8 129 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms