RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 DBF4BQ8NFT6 615 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 KIF12Q96FN5 646 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 SCLYQ96I15 445 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 HTATIP2Q9BUP3 242 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 LSM14BQ9BX40 385 aaKnown RBP20.08■□□□□ 0.81
SSBP4-212ENST00000601919 EDEM3Q9BZQ6 932 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 CNTN3Q9P232 1028 aa20.08■□□□□ 0.81
SSBP4-212ENST00000601919 R3HCC1Q9Y3T6 440 aaKnown RBP20.08■□□□□ 0.81
SSBP4-212ENST00000601919 DNAH12Q6ZR08 3092 aa20.08■□□□□ 0.8
SSBP4-212ENST00000601919 ZC3H11AO75152 810 aaKnown RBP eCLIP20.07■□□□□ 0.8
SSBP4-212ENST00000601919 PON1P27169 355 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 KCNMA1Q12791 1236 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 GPNMBQ14956 572 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 EPC2Q52LR7 807 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 LMBRD2Q68DH5 695 aaPredicted RBP20.07■□□□□ 0.8
SSBP4-212ENST00000601919 ALKAL1Q6UXT8 129 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 ECHDC2Q86YB7 292 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 ZNF397Q8NF99 534 aaPredicted RBP20.07■□□□□ 0.8
SSBP4-212ENST00000601919 ZNF516Q92618 1163 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 RPS6KC1Q96S38 1066 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 IMPG2Q9BZV3 1241 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 MTMR12Q9C0I1 747 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 INTS2Q9H0H0 1204 aaKnown RBP20.07■□□□□ 0.8
SSBP4-212ENST00000601919 FAM207AQ9NSI2 230 aaPredicted RBP20.07■□□□□ 0.8
SSBP4-212ENST00000601919 RAB20Q9NX57 234 aa20.07■□□□□ 0.8
SSBP4-212ENST00000601919 C9IYK1 514 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 PFKMP08237 780 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 NFICP08651 508 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 KCNE1P15382 129 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 RFX1P22670 979 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 DEKP35659 375 aaKnown RBP20.06■□□□□ 0.8
SSBP4-212ENST00000601919 PIK3CAP42336 1068 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 TBX2Q13207 712 aaPredicted RBP20.06■□□□□ 0.8
SSBP4-212ENST00000601919 TRPC3Q13507 836 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 PTPN21Q16825 1174 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 XKR4Q5GH76 650 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 WDR44Q5JSH3 913 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 TDRD10Q5VZ19 366 aaKnown RBP20.06■□□□□ 0.8
SSBP4-212ENST00000601919 CNKSR3Q6P9H4 555 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 TRIM65Q6PJ69 517 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 TRAPPC11Q7Z392 1133 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 EFCAB13Q8IY85 973 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 RPUSD2Q8IZ73 545 aaKnown RBP20.06■□□□□ 0.8
SSBP4-212ENST00000601919 BEST2Q8NFU1 509 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 OR5B17Q8NGF7 314 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 FAM81BQ96LP2 452 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
SSBP4-212ENST00000601919 PTPRJQ12913 1337 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 A0A1W2PQJ5 194 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 TRIM43BA6NCK2 446 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 SLC9A1P19634 815 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 FAM189BP81408 668 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 MFSD5Q6N075 450 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 CACNA2D4Q7Z3S7 1137 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 DEFB128Q7Z7B8 93 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 CNGA4Q8IV77 575 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 RNF169Q8NCN4 708 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 TAS1R2Q8TE23 839 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 TRIM43Q96BQ3 446 aaPredicted RBP20.05■□□□□ 0.8
SSBP4-212ENST00000601919 ABHD8Q96I13 439 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 ELAC1Q9H777 363 aaKnown RBP20.05■□□□□ 0.8
SSBP4-212ENST00000601919 RSAD1Q9HA92 442 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 SLC38A7Q9NVC3 462 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 CEP72Q9P209 647 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 FBXL5Q9UKA1 691 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 ITGA11Q9UKX5 1188 aa20.05■□□□□ 0.8
SSBP4-212ENST00000601919 UBQLN1Q9UMX0 589 aaKnown RBP20.05■□□□□ 0.8
SSBP4-212ENST00000601919 ALPK3Q96L96 1907 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 AKR1B15C9JRZ8 316 aaPredicted RBP20.04■□□□□ 0.8
SSBP4-212ENST00000601919 ENPP3O14638 875 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 MEFVO15553 781 aaPredicted RBP20.04■□□□□ 0.8
SSBP4-212ENST00000601919 HLA-DRAP01903 254 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 KLK7P49862 253 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 NCOA4Q13772 614 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 IKBKEQ14164 716 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 TSR1Q2NL82 804 aaKnown RBP20.04■□□□□ 0.8
SSBP4-212ENST00000601919 KLHDC7AQ5VTJ3 777 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 RTN4RL1Q86UN2 441 aaPredicted RBP20.04■□□□□ 0.8
SSBP4-212ENST00000601919 NT5C1BQ96P26 610 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 TMEM161AQ9NX61 479 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 DPP3Q9NY33 737 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 KLK14Q9P0G3 267 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 APEX2Q9UBZ4 518 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 CAPN11Q9UMQ6 739 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 LUC7L2Q9Y383 392 aaKnown RBP20.04■□□□□ 0.8
SSBP4-212ENST00000601919 BRCA2P51587 3418 aa20.04■□□□□ 0.8
SSBP4-212ENST00000601919 TET1Q8NFU7 2136 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 SMIM28A0A1B0GU29 152 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 EFCAB14O75071 495 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 GYPCP04921 128 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 CYP3A5P20815 502 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 SGSM1Q2NKQ1 1148 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 AGMOQ6ZNB7 445 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 CCDC186Q7Z3E2 898 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 ZNF598Q86UK7 904 aaKnown RBP20.03■□□□□ 0.8
SSBP4-212ENST00000601919 LMO3Q8TAP4 145 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 CPLX3Q8WVH0 158 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 LINC01599Q8WXQ3 324 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 RSPH1Q8WYR4 309 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 TAF4BQ92750 862 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms