RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SPAG1Q07617 926 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 NAB2Q15742 525 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 CD302Q8IX05 232 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 GPD1LQ8N335 351 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 GOLGA5Q8TBA6 731 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 MICAL1Q8TDZ2 1067 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 BCL7CQ8WUZ0 217 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 KIF12Q96FN5 646 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 ZMAT2Q96NC0 199 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 AGPAT3Q9NRZ7 376 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 LMBRD1Q9NUN5 540 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 CACNG4Q9UBN1 327 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 XPOTO43592 962 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 HSP90AA2PQ14568 343 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 CRELD2Q6UXH1 353 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 ZSWIM2Q8NEG5 633 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 RABGGTAQ92696 567 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 UROC1Q96N76 676 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 GOLGA2P5Q9HBQ8 144 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 ENTPD7Q9NQZ7 604 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 MARCH5Q9NX47 278 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 HSPBP1Q9NZL4 362 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 THEGQ9P2T0 379 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 MAPK8IP1Q9UQF2 711 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 TTC28Q96AY4 2481 aa21.37■■□□□ 1.01
SHKBP1-214ENST00000597396 IL18RAPO95256 599 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 CYP2J2P51589 502 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 POU5F1Q01860 360 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 CAMK1Q14012 370 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 BMS1Q14692 1282 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 ZNF658Q5TYW1 1059 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 TMC7Q7Z402 723 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 DDX53Q86TM3 631 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 BRSK2Q8IWQ3 736 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 VPS52Q8N1B4 723 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 SPATA20Q8TB22 786 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 C18orf25Q96B23 403 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 TSPAN18Q96SJ8 248 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 PAAF1Q9BRP4 392 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 NSUN3Q9H649 340 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 ASB7Q9H672 318 aa21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 RBAKQ9NYW8 714 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 UBQLN1Q9UMX0 589 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-214ENST00000597396 TADA2AO75478 443 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 ADRB2P07550 413 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 CA8P35219 290 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 IRS1P35568 1242 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 ERVFC1P60507 584 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 SOX4Q06945 474 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 PLPP4Q5VZY2 271 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 JADE1Q6IE81 842 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 PDE12Q6L8Q7 609 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 SMYD4Q8IYR2 804 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 GUF1Q8N442 669 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 ATXN2LQ8WWM7 1075 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 PPP2R3CQ969Q6 453 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 DDX27Q96GQ7 796 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 TCF25Q9BQ70 676 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 GTPBP4Q9BZE4 634 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 KIAA1586Q9HCI6 787 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 STK39Q9UEW8 545 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 ADAM28Q9UKQ2 775 aa21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-214ENST00000597396 SPTBN5Q9NRC6 3674 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 ZNF233A6NK53 670 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 F8W810 466 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 PDXKO00764 312 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 CALUO43852 315 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 CLCNKBP51801 687 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 TMEM132DQ14C87 1099 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 CAMK4Q16566 473 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 C12orf56Q8IXR9 622 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 XXYLT1Q8NBI6 393 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 HASPINQ8TF76 798 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 KCTD10Q9H3F6 313 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 TUBGCP4Q9UGJ1 667 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 MAN1B1Q9UKM7 699 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 DERAQ9Y315 318 aa21.34■■□□□ 1.01
SHKBP1-214ENST00000597396 VWA8A3KMH1 1905 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 PODXLO00592 558 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 KIF4AO95239 1232 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 NFICP08651 508 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 SMC1AQ14683 1233 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 SKIV2LQ15477 1246 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 TCEAL5Q5H9L2 206 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 ISM2Q6H9L7 571 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 FUT10Q6P4F1 479 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 DCLRE1AQ6PJP8 1040 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 BEST2Q8NFU1 509 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 HERC2P3Q9BVR0 1158 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 VN1R3Q9BXE9 311 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 ZBP1Q9H171 429 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 NGRNQ9NPE2 291 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 PCDHGC5Q9Y5F6 944 aa21.33■■□□□ 1.01
SHKBP1-214ENST00000597396 SF3B1O75533 1304 aaKnown RBP eCLIP21.32■■□□□ 1
SHKBP1-214ENST00000597396 FSCN2O14926 492 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 EXOC3O60645 756 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 B3GAT3O94766 335 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 SOD2P04179 222 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 CYP3A5P20815 502 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms