RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 INPPL1O15357 1258 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 RECQL4O94761 1208 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 DDHD2O94830 711 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 ALDH2P05091 517 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 GALTP07902 379 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 MAPTP10636 758 aaKnown RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 ABCD1P33897 745 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 MATR3P43243 847 aaKnown RBP eCLIP11.35□□□□□ -0.59
SDF2-208ENST00000589788 SLC11A1P49279 550 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 ZNF131P52739 623 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 KRT85P78386 507 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 TFF2Q03403 129 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 ZNF568Q3ZCX4 644 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 TAS1R3Q7RTX0 852 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 TMC7Q7Z402 723 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 HAUS6Q7Z4H7 955 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 RNF135Q8IUD6 432 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 DEPDC4Q8N2C3 294 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 IGSF21Q96ID5 467 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 TCF25Q9BQ70 676 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 TMEM175Q9BSA9 504 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 IGFLR1Q9H665 355 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 SNTG2Q9NY99 539 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 FAM13BQ9NYF5 915 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 ANKFY1Q9P2R3 1169 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 RCOR1Q9UKL0 485 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 FAN1Q9Y2M0 1017 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 GDAQ9Y2T3 454 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 A0A087X0B3 334 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 MYMKA6NI61 221 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 TOM1L1O75674 476 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 MCF2P10911 925 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 HARSP12081 509 aaKnown RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 IDEP14735 1019 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 CA8P35219 290 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 IRS1P35568 1242 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 YARSP54577 528 aaKnown RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 NCKAP1LP55160 1127 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 ERVFC1P60507 584 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 HYAL1Q12794 435 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 GRIK3Q13003 919 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 AXDND1Q5T1B0 1012 aaPredicted RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 PLPP4Q5VZY2 271 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 SHC4Q6S5L8 630 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 MPZL3Q6UWV2 235 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 ZPBP2Q6X784 338 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 IQUBQ8NA54 791 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 PLPP7Q8NBV4 271 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 DHX58Q96C10 678 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 SPATA32Q96LK8 384 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 ASB2Q96Q27 587 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 CCDC94Q9BW85 323 aaPredicted RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 LRRC27Q9C0I9 530 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 CDT1Q9H211 546 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 CUEDC2Q9H467 287 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 TLE6Q9H808 572 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 UBE2ZQ9H832 354 aaPredicted RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 NGRNQ9NPE2 291 aaKnown RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 TOPORSQ9NS56 1045 aaPredicted RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 MIOSQ9NXC5 875 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 CLDND1Q9NY35 253 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 PCDHA7Q9UN72 937 aa11.35□□□□□ -0.59
SDF2-208ENST00000589788 PRG3Q9Y2Y8 225 aaPredicted RBP11.35□□□□□ -0.59
SDF2-208ENST00000589788 CDH23Q9H251 3354 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 NRP1O14786 923 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 FSCN2O14926 492 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 HNRNPDLO14979 420 aaKnown RBP11.34□□□□□ -0.59
SDF2-208ENST00000589788 CLDN3O15551 220 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 B4GALT3O60512 393 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 THP07101 528 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 GAP43P17677 238 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 KCNA5P22460 613 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 NMT1P30419 496 aaKnown RBP11.34□□□□□ -0.59
SDF2-208ENST00000589788 GRM5P41594 1212 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 OR1G1P47890 313 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 NRIP1P48552 1158 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 LIG4P49917 911 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 OSTNP61366 133 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 AMPD3Q01432 767 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 DSC1Q08554 894 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 NCOA4Q13772 614 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 SMC1AQ14683 1233 aaKnown RBP11.34□□□□□ -0.59
SDF2-208ENST00000589788 NOLC1Q14978 699 aaKnown RBP eCLIP11.34□□□□□ -0.59
SDF2-208ENST00000589788 ADGRD2Q7Z7M1 963 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 DDX53Q86TM3 631 aaKnown RBP11.34□□□□□ -0.59
SDF2-208ENST00000589788 RBM23Q86U06 439 aaKnown RBP11.34□□□□□ -0.59
SDF2-208ENST00000589788 SFR1Q86XK3 245 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 COLGALT2Q8IYK4 626 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 VPS52Q8N1B4 723 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 TMEM87AQ8NBN3 555 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 PABPC5Q96DU9 382 aaKnown RBP11.34□□□□□ -0.59
SDF2-208ENST00000589788 COLEC11Q9BWP8 271 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 PTPRHQ9HD43 1115 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 SEL1LQ9UBV2 794 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 STK39Q9UEW8 545 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 TBX20Q9UMR3 447 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 PCDHGC5Q9Y5F6 944 aa11.34□□□□□ -0.59
SDF2-208ENST00000589788 BRWD1Q9NSI6 2320 aa11.33□□□□□ -0.59
SDF2-208ENST00000589788 COL6A3P12111 3177 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms