RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 C1orf131Q8NDD1 294 aaKnown RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 CCDC148Q8NFR7 591 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 CFAP61Q8NHU2 1237 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 ZNF473Q8WTR7 871 aaKnown RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 COG1Q8WTW3 980 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 SEC14L1Q92503 715 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 STAMBPL1Q96FJ0 436 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 MPP4Q96JB8 637 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 GDAP1L1Q96MZ0 367 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 NDNQ99608 321 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 SCAND2PQ9GZW5 306 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 SIL1Q9H173 461 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 PREBQ9HCU5 417 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 GCM1Q9NP62 436 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 DDX21Q9NR30 783 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 TBCCD1Q9NVR7 557 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 ITSN2Q9NZM3 1697 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 ZMAT5Q9UDW3 170 aaKnown RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 SSX2IPQ9Y2D8 614 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 R3HDM2Q9Y2K5 976 aaKnown RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 USP16Q9Y5T5 823 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 IKBKGQ9Y6K9 419 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 PLA2R1Q13018 1463 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 FAM135BQ49AJ0 1406 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CTAGE15A4D2H0 777 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 TBKBP1A7MCY6 615 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 N4BP3O15049 544 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 EFCAB14O75071 495 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 TBCAO75347 108 aaKnown RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 FAM107AO95990 144 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 FUCA1P04066 466 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CLTAP09496 248 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CTAGE8P0CG41 777 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ATICP31939 592 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 KRT9P35527 623 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ZNF132P52740 706 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ELF3P78545 371 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SRSF3P84103 164 aaKnown RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SPIDRQ14159 915 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ARHGEF6Q15052 776 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CHRNA2Q15822 529 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SLC44A4Q53GD3 710 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ANKRD20A8PQ5CZ79 823 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SPECC1Q5M775 1068 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 NAA35Q5VZE5 725 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ALS2CLQ60I27 953 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ADALQ6DHV7 355 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CYP4F22Q6NT55 531 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SYDE1Q6ZW31 735 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CEP68Q76N32 757 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 NOP9Q86U38 636 aaKnown RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CTAGE6Q86UF2 777 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 TTC30AQ86WT1 665 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CTAGE4Q8IX94 777 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SLC15A3Q8IY34 581 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SYNPOQ8N3V7 929 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ANKRD44Q8N8A2 993 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 STKLD1Q8NE28 680 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 IFT81Q8WYA0 676 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 KIFAP3Q92845 792 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 GFM2Q969S9 779 aaKnown RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 TRMT2BQ96GJ1 504 aaKnown RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 RPGRIP1Q96KN7 1286 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ZNF570Q96NI8 536 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 MRPL4Q9BYD3 311 aaKnown RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SEZ6LQ9BYH1 1024 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 PUS3Q9BZE2 481 aaKnown RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 PDGFDQ9GZP0 370 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 RNF38Q9H0F5 515 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 EPC1Q9H2F5 836 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 EPB41L1Q9H4G0 881 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 PIF1Q9H611 641 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 RPAP3Q9H6T3 665 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-203ENST00000585448 DCTPP1Q9H773 170 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 CD320Q9NPF0 282 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 HAUS2Q9NVX0 235 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 TMEM260Q9NX78 707 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 FBXL7Q9UJT9 491 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 ZNF652Q9Y2D9 606 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 PCDHA2Q9Y5H9 948 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 SPO11Q9Y5K1 396 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 PTCH2Q9Y6C5 1203 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 COMMD10Q9Y6G5 202 aa6.62□□□□□ -1.35
SMAD4-203ENST00000585448 LAMC1P11047 1609 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 BIVM-ERCC5R4GMW8 1640 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 WDR62O43379 1518 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 ADGRL3Q9HAR2 1447 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 KIF24Q5T7B8 1368 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 ABCC11Q96J66 1382 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 DPPA5A6NC42 116 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 VWA3AA6NCI4 1184 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 LSM1O15116 133 aaKnown RBP6.61□□□□□ -1.35
SMAD4-203ENST00000585448 PRPF3O43395 683 aaKnown RBP6.61□□□□□ -1.35
SMAD4-203ENST00000585448 MSCO60682 206 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 GFPT2O94808 682 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 ZNF202O95125 648 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 NTRK1P04629 796 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 C8AP07357 584 aa6.61□□□□□ -1.35
SMAD4-203ENST00000585448 PDGFRBP09619 1106 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms