RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 KBTBD4Q9NVX7 518 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 USP15Q9Y4E8 981 aaPredicted RBP11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 TRIOO75962 3097 aa11.21□□□□□ -0.62
PPP4R1-220ENST00000581835 C2orf16Q68DN1 1984 aa11.21□□□□□ -0.62
PPP4R1-220ENST00000581835 DOCK6Q96HP0 2047 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 A0A0B4J269 797 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 TTC26A0AVF1 554 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 ANKRD63C9JTQ0 380 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 OGTO15294 1046 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 TEX28O15482 410 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 POLR2DO15514 142 aaKnown RBP11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 B3GAT3O94766 335 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 CLTAP09496 248 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 CXCL8P10145 99 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 IGFBP6P24592 240 aaPredicted RBP11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 TNFSF9P41273 254 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 BECN1Q14457 450 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 KYAT1Q16773 422 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 HERC4Q5GLZ8 1057 aaPredicted RBP11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 RTP2Q5QGT7 225 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 ZBTB41Q5SVQ8 909 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 FAM171A1Q5VUB5 890 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 RESP18Q5W5W9 173 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 DCLRE1AQ6PJP8 1040 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 CD300LGQ6UXG3 332 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 IQUBQ8NA54 791 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 HVCN1Q96D96 273 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 APOL5Q9BWW9 433 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 TRIM9Q9C026 710 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 LRRC27Q9C0I9 530 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 IKZF4Q9H2S9 585 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 PLEKHA5Q9HAU0 1116 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 OLFML3Q9NRN5 406 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 PANK4Q9NVE7 773 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 TBC1D7Q9P0N9 293 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 STYXL1Q9Y6J8 313 aa11.2□□□□□ -0.62
PPP4R1-220ENST00000581835 TISP43B9A030 160 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 GCNT3O95395 438 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 ADH1AP07327 375 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 ADRB2P07550 413 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 SSTR3P32745 418 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 KRT85P78386 507 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 AMPD3Q01432 767 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 ITIH3Q06033 890 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 KCNA1Q09470 495 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 ELAVL2Q12926 359 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 CBX2Q14781 532 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 ENOX2Q16206 610 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 L1TD1Q5T7N2 865 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 CEP57Q86XR8 500 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 CCDC65Q8IXS2 484 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 C3orf58Q8NDZ4 430 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 RIN2Q8WYP3 895 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 PIK3R5Q8WYR1 880 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.624e-7■□□□□ 9.9
PPP4R1-220ENST00000581835 C18orf25Q96B23 403 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 TTPALQ9BTX7 342 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 MSTO1Q9BUK6 570 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 PHF7Q9BWX1 381 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 ADAM7Q9H2U9 754 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 DZANK1Q9NVP4 752 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 FAM13BQ9NYF5 915 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 FNIP2Q9P278 1114 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 CPSF3Q9UKF6 684 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 ATP6V1DQ9Y5K8 247 aa11.19□□□□□ -0.62
PPP4R1-220ENST00000581835 SCN1AP35498 2009 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 LACTBL1A8MY62 500 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 PODXLO00592 558 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 MYBP10242 640 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 RPL17P18621 184 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 FGFR3P22607 806 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 ADSSP30520 456 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 RPL9P32969 192 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 ACOT2P49753 483 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 CASP5P51878 434 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 SPAG1Q07617 926 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 ALCAMQ13740 583 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 ZBTB6Q15916 424 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 RARS2Q5T160 578 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 ADALQ6DHV7 355 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 SLFN12LQ6IEE8 588 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 CES5AQ6NT32 575 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 KANK3Q6NY19 840 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 LILRA6Q6PI73 481 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 PRSS55Q6UWB4 352 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 C12orf76Q8N812 135 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 LNX1Q8TBB1 728 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 SPATA32Q96LK8 384 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 ACCSQ96QU6 501 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 POP1Q99575 1024 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms