RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 FOXR2Q6PJQ5 311 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 ARHGAP27Q6ZUM4 889 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 KIAA0907Q7Z7F0 614 aaPredicted RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 OR2W6PQ8NHA6 318 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 CHURC1Q8WUH1 139 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 ZNF296Q8WUU4 475 aaPredicted RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 NACC1Q96RE7 527 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 TSPYL1Q9H0U9 437 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 OSGEPQ9NPF4 335 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 PLCB1Q9NQ66 1216 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 VAV3Q9UKW4 847 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 FRMD3A2A2Y4 597 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 VGLL3A8MV65 326 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 TGFB1I1O43294 461 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 ITGA4P13612 1032 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 COPB2P35606 906 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 FMO5P49326 533 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 IFFO1Q0D2I5 559 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 TRAF1Q13077 416 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 SQSTM1Q13501 440 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 CEP55Q53EZ4 464 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 C10orf76Q5T2E6 689 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 TATDN1Q6P1N9 297 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 OTOP1Q7RTM1 612 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 MIER3Q7Z3K6 550 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 MICALL1Q8N3F8 863 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 GMCL1P1Q8NEA9 526 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 PBKQ96KB5 322 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 MBOAT7Q96N66 472 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 LXNQ9BS40 222 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 POLR3CQ9BUI4 534 aaPredicted RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 TEKT3Q9BXF9 490 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 CELF4Q9BZC1 486 aaKnown RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 C11orf16Q9NQ32 467 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 CTTNBP2NLQ9P2B4 639 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 CHORDC1Q9UHD1 332 aaPredicted RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 PLAAQ9Y263 795 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 MRPL11Q9Y3B7 192 aaKnown RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 GOLGA8IPA6NC78 632 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 GOLGA8JA6NMD2 632 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 IPO5O00410 1097 aaKnown RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 DAPK3O43293 454 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 FGGP02679 453 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 MYCLP12524 364 aaPredicted RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 CTNNA1P35221 906 aaKnown RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 SOX5P35711 763 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 PHKA2P46019 1235 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 GUCY1A3Q02108 690 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CETN1Q12798 172 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 TNIP1Q15025 636 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 TTMPQ5BVD1 217 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 SAMD5Q5TGI4 173 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CCNJLQ8IV13 435 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 MDFIQ99750 246 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 INTS2Q9H0H0 1204 aaKnown RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 ABI2Q9NYB9 513 aaPredicted RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 UBP1Q9NZI7 540 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CCPG1Q9ULG6 757 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 COL24A1Q17RW2 1714 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 SMIM23A6NLE4 172 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 TISP43B9A030 160 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 SLC16A3O15427 465 aaKnown RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 TTI1O43156 1089 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 BUB1BO60566 1050 aaPredicted RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 HIP1RO75146 1068 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CCDC172P0C7W6 258 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 ALAS1P13196 640 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CIITAP33076 1130 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 GCLMP48507 274 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 LIG3P49916 1009 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 SP4Q02446 784 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 POU4F2Q12837 409 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CBWD6Q4V339 395 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CBWD3Q5JTY5 395 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 KIAA1755Q5JYT7 1200 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CBWD5Q5RIA9 395 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 EPM2AIP1Q7L775 607 aaPredicted RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 LDHDQ86WU2 507 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 SYCE1Q8N0S2 351 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CCDC26Q8TAB7 109 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 WHAMMQ8TF30 809 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CAVIN3Q969G5 261 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CCDC127Q96BQ5 260 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 HSD17B14Q9BPX1 270 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 WDR11Q9BZH6 1224 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 UNC45AQ9H3U1 944 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 TAF1DQ9H5J8 278 aaPredicted RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 SPC25Q9HBM1 224 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 UBE2TQ9NPD8 197 aaPredicted RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 PPANQ9NQ55 473 aaKnown RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 GDF3Q9NR23 364 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 AGPAT3Q9NRZ7 376 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 CCDC169A6NNP5 214 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 ZBTB42B2RXF5 422 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 H0YHG0 523 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 SLC26A4O43511 780 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 ENTPD3O75355 529 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 KIAA0754O94854 1291 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 NR1D1P20393 614 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 LMNB1P20700 586 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms