RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TOPORSQ9NS56 1045 aaPredicted RBP16.04■□□□□ 0.16
FANCA-220ENST00000566409 LARSQ9P2J5 1176 aaKnown RBP16.04■□□□□ 0.16
FANCA-220ENST00000566409 ANKFY1Q9P2R3 1169 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 USTQ9Y2C2 406 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 I3L4J1 428 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 STX6O43752 255 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 N4BP1O75113 896 aaKnown RBP16.03■□□□□ 0.16
FANCA-220ENST00000566409 FGFR3P22607 806 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 YARSP54577 528 aaKnown RBP16.03■□□□□ 0.16
FANCA-220ENST00000566409 MCL1Q07820 350 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 NOLC1Q14978 699 aaKnown RBP eCLIP16.03■□□□□ 0.16
FANCA-220ENST00000566409 RSPO2Q6UXX9 243 aaPredicted RBP16.03■□□□□ 0.16
FANCA-220ENST00000566409 MYCT1Q8N699 235 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 HDAC7Q8WUI4 952 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 LARP4BQ92615 738 aaKnown RBP16.03■□□□□ 0.16
FANCA-220ENST00000566409 SNX21Q969T3 373 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 ASIC4Q96FT7 647 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 RHOBTB2Q9BYZ6 727 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 SMOC2Q9H3U7 446 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 CNTN3Q9P232 1028 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 TBX20Q9UMR3 447 aa16.03■□□□□ 0.16
FANCA-220ENST00000566409 ANK1P16157 1881 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 TMEM221A6NGB7 291 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 M0R296 226 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 CLDN3O15551 220 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 FAM189A1O60320 539 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 ASGR2P07307 311 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 BRCC3P46736 316 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 ELAVL2Q12926 359 aaKnown RBP16.02■□□□□ 0.16
FANCA-220ENST00000566409 SLC39A14Q15043 492 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 PSMD5Q16401 504 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 SLC39A4Q6P5W5 647 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.02■□□□□ 0.16
FANCA-220ENST00000566409 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 KREMEN2Q8NCW0 462 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 RASSF8Q8NHQ8 419 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 UROC1Q96N76 676 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 PLEKHA4Q9H4M7 779 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 PARVGQ9HBI0 331 aa16.02■□□□□ 0.16
FANCA-220ENST00000566409 NOTCH4Q99466 2003 aa16.02■□□□□ 0.15
FANCA-220ENST00000566409 PIEZO1Q92508 2521 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 A0A087X0B3 334 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 TRAK2O60296 914 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 FAM13AO94988 1023 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 PIGRP01833 764 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 TKTP29401 623 aaKnown RBP16.01■□□□□ 0.15
FANCA-220ENST00000566409 NMT1P30419 496 aaKnown RBP16.01■□□□□ 0.15
FANCA-220ENST00000566409 TNFSF9P41273 254 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 GTF2BQ00403 316 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 CREMQ03060 361 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 SIGLEC14Q08ET2 396 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 ZBTB41Q5SVQ8 909 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 BMP8AQ7Z5Y6 402 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 TDRD5Q8NAT2 981 aaKnown RBP16.01■□□□□ 0.15
FANCA-220ENST00000566409 ZSCAN16Q9H4T2 348 aaPredicted RBP16.01■□□□□ 0.15
FANCA-220ENST00000566409 WDR6Q9NNW5 1121 aaKnown RBP16.01■□□□□ 0.15
FANCA-220ENST00000566409 SLC38A7Q9NVC3 462 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 FBXW11Q9UKB1 542 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 HCN4Q9Y3Q4 1203 aa16.01■□□□□ 0.15
FANCA-220ENST00000566409 ARIH1Q9Y4X5 557 aaPredicted RBP16.01■□□□□ 0.15
FANCA-220ENST00000566409 MORC2Q9Y6X9 1032 aaPredicted RBP16.01■□□□□ 0.15
FANCA-220ENST00000566409 TTC26A0AVF1 554 aa16■□□□□ 0.15
FANCA-220ENST00000566409 MYMKA6NI61 221 aa16■□□□□ 0.15
FANCA-220ENST00000566409 H0YCG3 227 aa16■□□□□ 0.15
FANCA-220ENST00000566409 K7ENM7 598 aa16■□□□□ 0.15
FANCA-220ENST00000566409 PODXLO00592 558 aa16■□□□□ 0.15
FANCA-220ENST00000566409 ZMYND10O75800 440 aa16■□□□□ 0.15
FANCA-220ENST00000566409 KRT18P05783 430 aaKnown RBP16■□□□□ 0.15
FANCA-220ENST00000566409 CXCL8P10145 99 aa16■□□□□ 0.15
FANCA-220ENST00000566409 OR1D2P34982 312 aa16■□□□□ 0.15
FANCA-220ENST00000566409 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
FANCA-220ENST00000566409 SPAG1Q07617 926 aa16■□□□□ 0.15
FANCA-220ENST00000566409 ZC2HC1CQ53FD0 456 aaPredicted RBP16■□□□□ 0.15
FANCA-220ENST00000566409 CYP26C1Q6V0L0 522 aa16■□□□□ 0.15
FANCA-220ENST00000566409 CCDC149Q6ZUS6 474 aa16■□□□□ 0.15
FANCA-220ENST00000566409 SMG7Q92540 1137 aaKnown RBP16■□□□□ 0.15
FANCA-220ENST00000566409 DDX27Q96GQ7 796 aaKnown RBP16■□□□□ 0.15
FANCA-220ENST00000566409 PRKD2Q9BZL6 878 aa16■□□□□ 0.15
FANCA-220ENST00000566409 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
FANCA-220ENST00000566409 ZHX3Q9H4I2 956 aa16■□□□□ 0.15
FANCA-220ENST00000566409 MTRRQ9UBK8 725 aa16■□□□□ 0.15
FANCA-220ENST00000566409 TUBGCP4Q9UGJ1 667 aa16■□□□□ 0.15
FANCA-220ENST00000566409 DPP7Q9UHL4 492 aa16■□□□□ 0.15
FANCA-220ENST00000566409 SORCS3Q9UPU3 1222 aa16■□□□□ 0.15
FANCA-220ENST00000566409 KMT2EQ8IZD2 1858 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 CACNA1HO95180 2353 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 ANKRD63C9JTQ0 380 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 HNRNPDLO14979 420 aaKnown RBP15.99■□□□□ 0.15
FANCA-220ENST00000566409 CLTAP09496 248 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 RPL9P32969 192 aaKnown RBP15.99■□□□□ 0.15
FANCA-220ENST00000566409 RAB33AQ14088 237 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 ZBTB6Q15916 424 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 RRAGBQ5VZM2 374 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 OTOP3Q7RTS5 596 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 DYMQ7RTS9 669 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 PBXIP1Q96AQ6 731 aa15.99■□□□□ 0.15
FANCA-220ENST00000566409 DNAJC19Q96DA6 116 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms