RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 BMS1Q14692 1282 aaKnown RBP21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 SLC30A5Q8TAD4 765 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 GTF2IRD1Q9UHL9 959 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 NAGPAQ9UK23 515 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 BRCA2P51587 3418 aa21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 CLTAP09496 248 aa21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 CASQ1P31415 396 aa21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 EFCAB13Q8IY85 973 aa21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 SLC35F6Q8N357 371 aa21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 PXYLP1Q8TE99 480 aa21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 TMEM40Q8WWA1 233 aa21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 MTMR12Q9C0I1 747 aa21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 RPF1Q9H9Y2 349 aaKnown RBP21.08■□□□□ 0.97
RBFOX1-215ENST00000553186 CST5P28325 142 aaPredicted RBP21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 PCBP1Q15365 356 aaKnown RBP eCLIP21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 DUOXA2Q1HG44 320 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 WDR44Q5JSH3 913 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 ENOSF1Q7L5Y1 443 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 TRAPPC11Q7Z392 1133 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 NME8Q8N427 588 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 LNX1Q8TBB1 728 aaPredicted RBP21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 RAET1EQ8TD07 263 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 L2HGDHQ9H9P8 463 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 APOBEC3GQ9HC16 384 aaKnown RBP21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 C1orf112Q9NSG2 853 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 CST3P01034 146 aaPredicted RBP21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 ASGR1P07306 291 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 NCOA4Q13772 614 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 SNX17Q15036 470 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 NAB2Q15742 525 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 KCNA10Q16322 511 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 SPOPLQ6IQ16 392 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 TAF2Q6P1X5 1199 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 VPS36Q86VN1 386 aa21.07■□□□□ 0.96
RBFOX1-215ENST00000553186 IL18RAPO95256 599 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 ALKBH5Q6P6C2 394 aaKnown RBP21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 CATSPER4Q7RTX7 472 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 MYRIPQ8NFW9 859 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 FAM81BQ96LP2 452 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 ARID3AQ99856 593 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 SALL4Q9UJQ4 1053 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 KYAT1Q16773 422 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 SLC10A6Q3KNW5 377 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 C10orf76Q5T2E6 689 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 GDF6Q6KF10 455 aaPredicted RBP21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 GLYCTKQ8IVS8 523 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 ZNF710Q8N1W2 664 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 ZNF296Q8WUU4 475 aaPredicted RBP21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 DHX38Q92620 1227 aaKnown RBP21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 ERO1AQ96HE7 468 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 ADPGKQ9BRR6 497 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 PACSIN1Q9BY11 444 aa21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 LUC7LQ9NQ29 371 aaKnown RBP21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 DDX20Q9UHI6 824 aaKnown RBP21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 TRIP12Q14669 1992 aaPredicted RBP21.06■□□□□ 0.96
RBFOX1-215ENST00000553186 MACROD2A1Z1Q3 448 aa21.05■□□□□ 0.96
RBFOX1-215ENST00000553186 LACTBL1A8MY62 500 aa21.05■□□□□ 0.96
RBFOX1-215ENST00000553186 CYP26A1O43174 497 aa21.05■□□□□ 0.96
RBFOX1-215ENST00000553186 PHACTR2O75167 634 aa21.05■□□□□ 0.96
RBFOX1-215ENST00000553186 TFAMQ00059 246 aaKnown RBP21.05■□□□□ 0.96
RBFOX1-215ENST00000553186 THSD7BQ9C0I4 1608 aa21.05■□□□□ 0.96
RBFOX1-215ENST00000553186 FKTNO75072 461 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 ASS1P00966 412 aaKnown RBP21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 USP8P40818 1118 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 CRYBB1P53674 252 aaPredicted RBP21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 NOP14P78316 857 aaKnown RBP21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 TXLNBQ8N3L3 684 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 EPS8L1Q8TE68 723 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 SLC20A1Q8WUM9 679 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 NOCTQ9UK39 431 aaKnown RBP21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 NUB1Q9Y5A7 615 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 GRIN2DO15399 1336 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 SGPL1O95470 568 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 NCBP1Q09161 790 aaKnown RBP21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 DCAF4L1Q3SXM0 396 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 SLC47A2Q86VL8 602 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 SESTD1Q86VW0 696 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 SECISBP2LQ93073 1101 aaKnown RBP21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 AGPAT1Q99943 283 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 ASB7Q9H672 318 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 ACP6Q9NPH0 428 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 SAGE1Q9NXZ1 904 aa21.04■□□□□ 0.96
RBFOX1-215ENST00000553186 NFICP08651 508 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 TMEM191BP0C7N4 346 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 GRM5P41594 1212 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 NOTUMQ6P988 496 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 SLC27A1Q6PCB7 646 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 PALB2Q86YC2 1186 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 ATP8B3O60423 1300 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 UMODL1Q5DID0 1318 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 MROH7Q68CQ1 1323 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 URI1O94763 535 aaPredicted RBP21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 MYCNP04198 464 aaPredicted RBP21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 ACO1P21399 889 aaKnown RBP21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 MYL6P60660 151 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 CUL2Q13617 745 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 JADE1Q6IE81 842 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 NOP9Q86U38 636 aaKnown RBP21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 SERINC5Q86VE9 423 aa21.03■□□□□ 0.96
RBFOX1-215ENST00000553186 DNAAF5Q86Y56 855 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms