RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CLCNKBP51801 687 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 RAB33AQ14088 237 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 NOLC1Q14978 699 aaKnown RBP eCLIP10.24□□□□□ -0.77
YBX3-218ENST00000546298 SF3A1Q15459 793 aaKnown RBP10.24□□□□□ -0.77
YBX3-218ENST00000546298 UPP1Q16831 310 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 UVSSAQ2YD98 709 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 PPM1LQ5SGD2 360 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 GPBP1Q86WP2 473 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 CEP120Q8N960 986 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 KCNN1Q92952 543 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 ZNF707Q96C28 371 aaPredicted RBP10.24□□□□□ -0.77
YBX3-218ENST00000546298 BICD1Q96G01 975 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 CXCL16Q9H2A7 254 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 MFSD1Q9H3U5 465 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 PLEKHA5Q9HAU0 1116 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 KCNK12Q9HB15 430 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 EPS15L1Q9UBC2 864 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 MTRRQ9UBK8 725 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 FBXW11Q9UKB1 542 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 NUB1Q9Y5A7 615 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 BACE2Q9Y5Z0 518 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 ZFP37Q9Y6Q3 630 aaPredicted RBP10.24□□□□□ -0.77
YBX3-218ENST00000546298 H7C4K7 107 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 PODXLO00592 558 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 ABLIM1O14639 778 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 SYN3O14994 580 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 TBCAO75347 108 aaKnown RBP10.23□□□□□ -0.77
YBX3-218ENST00000546298 C8AP07357 584 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 OR1D2P34982 312 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.77
YBX3-218ENST00000546298 NCKAP1LP55160 1127 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 NHLH1Q02575 133 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 MCL1Q07820 350 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 HAUS6Q7Z4H7 955 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 MYCT1Q8N699 235 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 CCSER1Q9C0I3 900 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 PARVGQ9HBI0 331 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 CNTN3Q9P232 1028 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 ANKFY1Q9P2R3 1169 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 CCDC39Q9UFE4 941 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 FBXL21Q9UKT6 434 aa10.23□□□□□ -0.77
YBX3-218ENST00000546298 TECTAO75443 2155 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 XPOTO43592 962 aaKnown RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 TRAK2O60296 914 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 POU2F2P09086 479 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 LAMP2P13473 410 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 PLCG1P19174 1290 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 FSHRP23945 695 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 TKTP29401 623 aaKnown RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 ELF1P32519 619 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 DDIT3P35638 169 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 TXLNAP40222 546 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 BRCC3P46736 316 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 LIG4P49917 911 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 SOX4Q06945 474 aaPredicted RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 DHX8Q14562 1220 aaKnown RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 KARSQ15046 597 aaKnown RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 SLC10A6Q3KNW5 377 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 ARSHQ5FYA8 562 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 APPL2Q8NEU8 664 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 FEZF2Q8TBJ5 459 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 LARP4BQ92615 738 aaKnown RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 RAD54LQ92698 747 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 INTS4Q96HW7 963 aaKnown RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 ZBTB45Q96K62 511 aaPredicted RBP10.22□□□□□ -0.77
YBX3-218ENST00000546298 REEP2Q9BRK0 252 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 ZHX3Q9H4I2 956 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 GOLGA2P5Q9HBQ8 144 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 BLOC1S4Q9NUP1 217 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 DUSP12Q9UNI6 340 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 CDY1Q9Y6F8 540 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 ATG2AQ2TAZ0 1938 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 VCANP13611 3396 aa10.22□□□□□ -0.77
YBX3-218ENST00000546298 NPHP3-ACAD11A0A0J9YXS1 232 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 K7ENM7 598 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 HNRNPDLO14979 420 aaKnown RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 ADAM12O43184 909 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 PDGFBP01127 241 aaPredicted RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 PIGRP01833 764 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 CYP3A5P20815 502 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 MARCKSP29966 332 aaPredicted RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 MCM4P33991 863 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 CLCN5P51795 746 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 ZNF131P52739 623 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 VCPP55072 806 aaKnown RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 PPP2R3AQ06190 1150 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 MCM6Q14566 821 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 AXDND1Q5T1B0 1012 aaPredicted RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 IER5LQ5T953 404 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 ASTLQ6HA08 431 aaPredicted RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 CD300LGQ6UXG3 332 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 GET4Q7L5D6 327 aaPredicted RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 GRASPQ7Z6J2 395 aaPredicted RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 ALYREFQ86V81 257 aaKnown RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 CD302Q8IX05 232 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 SLC44A3Q8N4M1 653 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 PRSS33Q8NF86 280 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 ZNF461Q8TAF7 563 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms