RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PCDHGA2Q9Y5H1 932 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 TPRP12270 2363 aaKnown RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 FAM170BA6NMN3 283 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 ACKR2O00590 384 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 PTGESO14684 152 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 PRKCBP05771 671 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 CDC25AP30304 524 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 NTHL1P78549 312 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 CREMQ03060 361 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 PRKCQQ04759 706 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 GRIK3Q13003 919 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
GABPB1-206ENST00000543881 RABEP1Q15276 862 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 MAPK6Q16659 721 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 SLC44A4Q53GD3 710 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 DEPTORQ8TB45 409 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 SECISBP2LQ93073 1101 aaKnown RBP13.07□□□□□ -0.32
GABPB1-206ENST00000543881 MMTAG2Q9BU76 263 aaKnown RBP13.07□□□□□ -0.32
GABPB1-206ENST00000543881 SNTG2Q9NY99 539 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 ADAM28Q9UKQ2 775 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 EPG5Q9HCE0 2579 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 ZMYM2Q9UBW7 1377 aa13.07□□□□□ -0.32
GABPB1-206ENST00000543881 E9PMD0 336 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 N4BP3O15049 544 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 LIG1P18858 919 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 NAB2Q15742 525 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 NT5DC1Q5TFE4 455 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 PRSS55Q6UWB4 352 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-206ENST00000543881 MTSS1LQ765P7 747 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 DAW1Q8N136 415 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 SNX29Q8TEQ0 813 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 FGF13Q92913 245 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 TMX3Q96JJ7 454 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 OSBPL6Q9BZF3 934 aa13.06□□□□□ -0.32
GABPB1-206ENST00000543881 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
GABPB1-206ENST00000543881 CDV3Q9UKY7 258 aaKnown RBP13.06□□□□□ -0.32
GABPB1-206ENST00000543881 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-206ENST00000543881 PRR5-ARHGAP8B1AHC4 643 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 RECQL4O94761 1208 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 CD72P21854 359 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 MAGEA9P43362 315 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 ARHGAP8P85298 464 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 PFKPQ01813 784 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 PPP2R5AQ15172 486 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 LIN9Q5TKA1 542 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-206ENST00000543881 ZBTB44Q8NCP5 570 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 LTB4R2Q9NPC1 389 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 ZSCAN32Q9NX65 697 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 FBXW11Q9UKB1 542 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 SMG5Q9UPR3 1016 aaKnown RBP13.05□□□□□ -0.32
GABPB1-206ENST00000543881 SPTBN2O15020 2390 aa13.05□□□□□ -0.32
GABPB1-206ENST00000543881 CASTOR2A6NHX0 329 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 TADA2AO75478 443 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 KIF4AO95239 1232 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 HNRNPA1P09651 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
GABPB1-206ENST00000543881 IGFBP6P24592 240 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-206ENST00000543881 PRPHP41219 470 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 LMNB2Q03252 620 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 MAPK7Q13164 816 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 TUSC3Q13454 348 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-206ENST00000543881 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 RTP2Q5QGT7 225 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 PPM1LQ5SGD2 360 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 ZBTB41Q5SVQ8 909 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 MCTP1Q6DN14 999 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 ITFG1Q8TB96 612 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 HASPINQ8TF76 798 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 KIFAP3Q92845 792 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 IFT74Q96LB3 600 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 RUSC1Q9BVN2 902 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 EPC1Q9H2F5 836 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 POLIQ9UNA4 740 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 SF3B1O75533 1304 aaKnown RBP eCLIP13.04□□□□□ -0.32
GABPB1-206ENST00000543881 DCDC2BA2VCK2 349 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 LAD1O00515 517 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 CCL16O15467 120 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 LILRB5O75023 590 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 HIP1RO75146 1068 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 C8AP07357 584 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 GJB2P29033 226 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 NPTX2P47972 431 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 EFNA5P52803 228 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 ATF7IP2Q5U623 682 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 KRT79Q5XKE5 535 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 RINT1Q6NUQ1 792 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 DTHD1Q6ZMT9 781 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 TAS1R3Q7RTX0 852 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 NELL1Q92832 810 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 ADPGKQ9BRR6 497 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 RTKNQ9BST9 563 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 USP18Q9UMW8 372 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 DNM3Q9UQ16 869 aa13.04□□□□□ -0.32
GABPB1-206ENST00000543881 GDAQ9Y2T3 454 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms