RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 BTBD3Q9Y2F9 522 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 TBC1D30Q9Y2I9 924 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 MTO1Q9Y2Z2 717 aaKnown RBP1.34□□□□□ -2.19
COPB1-212ENST00000534771 WNT6Q9Y6F9 365 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 NUMBLQ9Y6R0 609 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 PNPLA7Q6ZV29 1317 aa1.34□□□□□ -2.2
COPB1-212ENST00000534771 AATKQ6ZMQ8 1374 aa1.34□□□□□ -2.2
COPB1-212ENST00000534771 PRSS38A1L453 326 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 CXorf49A8MYA2 514 aaPredicted RBP1.33□□□□□ -2.2
COPB1-212ENST00000534771 PLD2O14939 933 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 MPPED1O15442 326 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 INSIG1O15503 277 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 PHF2O75151 1096 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 ERN1O75460 977 aaKnown RBP1.33□□□□□ -2.2
COPB1-212ENST00000534771 POMCP01189 267 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 JMJD7P0C870 316 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 CKBP12277 381 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 FGFR4P22455 802 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 GCSHP23434 173 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 CTSSP25774 331 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 CCKARP32238 428 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 CRHR1P34998 444 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 SREBF1P36956 1147 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 HSD11B2P80365 405 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 MEF2AQ02078 507 aaPredicted RBP1.33□□□□□ -2.2
COPB1-212ENST00000534771 RAPGEF1Q13905 1077 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 SF3B3Q15393 1217 aaKnown RBP1.33□□□□□ -2.2
COPB1-212ENST00000534771 ETFDHQ16134 617 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 CFAP100Q494V2 611 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 FAM153CQ494X1 144 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 SLC44A4Q53GD3 710 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 RRP12Q5JTH9 1297 aaKnown RBP1.33□□□□□ -2.2
COPB1-212ENST00000534771 ZBTB41Q5SVQ8 909 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 PRAMEF14Q5SWL7 426 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 KIAA0895LQ68EN5 471 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 CDCA2Q69YH5 1023 aaPredicted RBP1.33□□□□□ -2.2
COPB1-212ENST00000534771 AWAT2Q6E213 333 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 DENND1AQ8TEH3 1009 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 PAWRQ96IZ0 340 aaKnown RBP1.33□□□□□ -2.2
COPB1-212ENST00000534771 CLUHP3Q96NS8 147 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 ANO3Q9BYT9 981 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 SEMA4CQ9C0C4 833 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 ZMAT4Q9H898 229 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 NCOA5Q9HCD5 579 aaKnown RBP1.33□□□□□ -2.2
COPB1-212ENST00000534771 FAM30AQ9NZY2 134 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 RPTORQ8N122 1335 aa1.33□□□□□ -2.2
COPB1-212ENST00000534771 TRGV11A0A075B6L2 103 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 CBX4O00257 560 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 PPEF2O14830 753 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 PRSS23O95084 383 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 RAPGEF3O95398 923 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 CD1AP06126 327 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 ATP2A2P16615 1042 aaKnown RBP1.32□□□□□ -2.2
COPB1-212ENST00000534771 CERS1P27544 350 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 CANXP27824 592 aaKnown RBP1.32□□□□□ -2.2
COPB1-212ENST00000534771 ADSLP30566 484 aaPredicted RBP1.32□□□□□ -2.2
COPB1-212ENST00000534771 NR4A2P43354 598 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 MAPK10P53779 464 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 RAP2BP61225 183 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 TFF2Q03403 129 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 PPARAQ07869 468 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 SLC10A2Q12908 348 aaPredicted RBP1.32□□□□□ -2.2
COPB1-212ENST00000534771 LAMB3Q13751 1172 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 KLF9Q13886 244 aaPredicted RBP1.32□□□□□ -2.2
COPB1-212ENST00000534771 PTPRRQ15256 657 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 NBPF8Q3BBV2 869 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 FNDC3BQ53EP0 1204 aaKnown RBP1.32□□□□□ -2.2
COPB1-212ENST00000534771 PITRM1Q5JRX3 1037 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 MORN5Q5VZ52 161 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 CREB3L3Q68CJ9 461 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 SUMO4Q6EEV6 95 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 VWA1Q6PCB0 445 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 FAM180AQ6UWF9 173 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 TECPR1Q7Z6L1 1165 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 AMIGO2Q86SJ2 522 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 ZDHHC17Q8IUH5 632 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 LYSMD2Q8IV50 215 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 DRC7Q8IY82 874 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 SAMD14Q8IZD0 417 aaPredicted RBP1.32□□□□□ -2.2
COPB1-212ENST00000534771 EFHBQ8N7U6 833 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 JMYQ8N9B5 988 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 OR14C36Q8NHC7 312 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 ADAMTS15Q8TE58 950 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 TFAP2BQ92481 460 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 FBXL20Q96IG2 436 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 MED15Q96RN5 788 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 HAPLN3Q96S86 360 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 PNKPQ96T60 521 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 DNAJC7Q99615 494 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 MRI1Q9BV20 369 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 WNT8AQ9H1J5 351 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 H2AFY2Q9P0M6 372 aaPredicted RBP1.32□□□□□ -2.2
COPB1-212ENST00000534771 TMPRSS11EQ9UL52 423 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 PADI4Q9UM07 663 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 ST3GAL5Q9UNP4 418 aa1.32□□□□□ -2.2
COPB1-212ENST00000534771 CCDC187A0A096LP49 1063 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 CCDC78A2IDD5 438 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 FAM221BA6H8Z2 402 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 MYMKA6NI61 221 aa1.31□□□□□ -2.2
COPB1-212ENST00000534771 LINC01548A6NM66 108 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms