RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 LIN7AO14910 233 aaPredicted RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 STAM2O75886 525 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 UBA1P22314 1058 aaKnown RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 RFX1P22670 979 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 SYCE1Q8N0S2 351 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 WHAMMQ8TF30 809 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP35-207ENST00000530546 HVCN1Q96D96 273 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 ZBTB45Q96K62 511 aaPredicted RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 PBKQ96KB5 322 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 PCDHB18PQ96TA0 734 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 SPATC1LQ9H0A9 340 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 NOD2Q9HC29 1040 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 NFU1Q9UMS0 254 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 COG5Q9UP83 839 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 NOC2LQ9Y3T9 749 aaKnown RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 MYPNQ86TC9 1320 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 SYNGAP1Q96PV0 1343 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 RAD51CO43502 376 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 KRT5P13647 590 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 MARK3P27448 753 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 MFAP3P55082 362 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 TNNC1P63316 161 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 STRN3Q13033 797 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 LRIG3Q6UXM1 1119 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 DNERQ8NFT8 737 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 FHDC1Q9C0D6 1143 aaPredicted RBP12.37□□□□□ -0.43
USP35-207ENST00000530546 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 C17orf75Q9HAS0 396 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 RAB20Q9NX57 234 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 ANKFY1Q9P2R3 1169 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 ANKRD62A6NC57 917 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 MAPK13O15264 365 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 MMEP08473 750 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 ITGA4P13612 1032 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 GUCY2FP51841 1108 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 ELF3P78545 371 aaPredicted RBP12.37□□□□□ -0.43
USP35-207ENST00000530546 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
USP35-207ENST00000530546 LY6KQ17RY6 165 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 SEZ6Q53EL9 994 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 SLFN11Q7Z7L1 901 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 FBXL13Q8NEE6 735 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 PIK3R5Q8WYR1 880 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 SEC16BQ96JE7 1060 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 DDX47Q9H0S4 455 aaKnown RBP12.37□□□□□ -0.43
USP35-207ENST00000530546 PPANQ9NQ55 473 aaKnown RBP12.37□□□□□ -0.43
USP35-207ENST00000530546 SUCLA2Q9P2R7 463 aaPredicted RBP12.37□□□□□ -0.43
USP35-207ENST00000530546 STXBP5LQ9Y2K9 1186 aa12.37□□□□□ -0.43
USP35-207ENST00000530546 PGRMC1O00264 195 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 KRIT1O00522 736 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 SNUPNO95149 360 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 GGPS1O95749 300 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 PAEPP09466 180 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 TNNI1P19237 187 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 GLRA2P23416 452 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 IREB2P48200 963 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 BRDTQ58F21 947 aaPredicted RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 MICAL1Q8TDZ2 1067 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 EPS8L1Q8TE68 723 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 NSMCE1Q8WV22 266 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 SLC7A3Q8WY07 619 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 ITFG2Q969R8 447 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 MFSD14AQ96MC6 490 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 ASCC2Q9H1I8 757 aaPredicted RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 ARHGAP28Q9P2N2 729 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 C15orf41Q9Y2V0 281 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 NCANO14594 1321 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 GSTTP1A0A1W2PQM5 241 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 CHRNB2P17787 502 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 WNT7BP56706 349 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 NLRP11P59045 1033 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 CAPRIN2Q6IMN6 1127 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 BZW1Q7L1Q6 419 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 FAM71AQ8IYT1 594 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 HELQQ8TDG4 1101 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 TMEM174Q8WUU8 243 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 CASKIN2Q8WXE0 1202 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 CCT6BQ92526 530 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 FNBP1Q96RU3 617 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 TARS2Q9BW92 718 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 TMBIM4Q9HC24 238 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 CPSF2Q9P2I0 782 aaKnown RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 MAFBQ9Y5Q3 323 aaPredicted RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 K7ERI5 159 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 FAM153BP0C7A2 387 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 PECAM1P16284 738 aaPredicted RBP12.36□□□□□ -0.43
USP35-207ENST00000530546 ICAM3P32942 547 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 BIRC3Q13489 604 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 MESDQ14696 234 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 FAM153CQ494X1 144 aa12.36□□□□□ -0.43
USP35-207ENST00000530546 ZBTB41Q5SVQ8 909 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms