RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 HELQQ8TDG4 1101 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 NOC3LQ8WTT2 800 aaKnown RBP12.03□□□□□ -0.48
CCDC84-205ENST00000528088 ZNF689Q96CS4 500 aaPredicted RBP12.03□□□□□ -0.48
CCDC84-205ENST00000528088 HVCN1Q96D96 273 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 NECAB3Q96P71 396 aaPredicted RBP12.03□□□□□ -0.48
CCDC84-205ENST00000528088 ACCSQ96QU6 501 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 ACO2Q99798 780 aaKnown RBP12.03□□□□□ -0.48
CCDC84-205ENST00000528088 NXF3Q9H4D5 531 aaKnown RBP12.03□□□□□ -0.48
CCDC84-205ENST00000528088 ELAC1Q9H777 363 aaKnown RBP12.03□□□□□ -0.48
CCDC84-205ENST00000528088 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 TNFSF13BQ9Y275 285 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 GDAQ9Y2T3 454 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 HES2Q9Y543 173 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 IPPQ9Y573 584 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 MYO7AQ13402 2215 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 BRWD1Q9NSI6 2320 aa12.03□□□□□ -0.48
CCDC84-205ENST00000528088 PVALEFA0A1B0GWK0 134 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 CLDN3O15551 220 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 DGKIO75912 1065 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 PRPF6O94906 941 aaKnown RBP12.02□□□□□ -0.48
CCDC84-205ENST00000528088 CASP5P51878 434 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 OSTNP61366 133 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 GTF2BQ00403 316 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 RNASELQ05823 741 aaKnown RBP12.02□□□□□ -0.48
CCDC84-205ENST00000528088 GPM6BQ13491 265 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 UBXN11Q5T124 520 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 CNNM4Q6P4Q7 775 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 MPZL3Q6UWV2 235 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 ZPBP2Q6X784 338 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 CLEC17AQ6ZS10 378 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 FIBCD1Q8N539 461 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 URGCPQ8TCY9 931 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 SMARCE1Q969G3 411 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 TIGD1Q96MW7 591 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 RPS6KC1Q96S38 1066 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 RSAD1Q9HA92 442 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 XIRP2A4UGR9 3374 aa12.02□□□□□ -0.48
CCDC84-205ENST00000528088 TRIP11Q15643 1979 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 H3BNC9 293 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 TOM1L1O75674 476 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 BMP1P13497 986 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 AKAP5P24588 427 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 YARSP54577 528 aaKnown RBP12.02□□□□□ -0.49
CCDC84-205ENST00000528088 FAM189BP81408 668 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 DPYDQ12882 1025 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 NOLC1Q14978 699 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC84-205ENST00000528088 MAP4K3Q8IVH8 894 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 NELFCDQ8IXH7 590 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 THNSL1Q8IYQ7 743 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 ZBTB45Q96K62 511 aaPredicted RBP12.02□□□□□ -0.49
CCDC84-205ENST00000528088 FIZ1Q96SL8 496 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 CCDC94Q9BW85 323 aaPredicted RBP12.02□□□□□ -0.49
CCDC84-205ENST00000528088 FGFBP2Q9BYJ0 223 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 TMEM117Q9H0C3 514 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 CDT1Q9H211 546 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 ST6GALNAC4Q9H4F1 302 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 TMEM206Q9H813 350 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 UBN1Q9NPG3 1134 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 RMND1Q9NWS8 449 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 SNTG2Q9NY99 539 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 LMCD1Q9NZU5 365 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 KLK14Q9P0G3 267 aa12.02□□□□□ -0.49
CCDC84-205ENST00000528088 KIAA1671Q9BY89 1806 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 MEIS3P2A8K0S8 358 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 LZTS3O60299 673 aaPredicted RBP12.01□□□□□ -0.49
CCDC84-205ENST00000528088 ZNF623O75123 536 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 CSPG5O95196 566 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 ATF7P17544 494 aaPredicted RBP12.01□□□□□ -0.49
CCDC84-205ENST00000528088 CTNNB1P35222 781 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 BMPR1AP36894 532 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 MLH1P40692 756 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 PSMD2Q13200 908 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 CAMK4Q16566 473 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 CMTR2Q8IYT2 770 aaKnown RBP12.01□□□□□ -0.49
CCDC84-205ENST00000528088 LRRC43Q8N309 656 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 SMG8Q8ND04 991 aaKnown RBP12.01□□□□□ -0.49
CCDC84-205ENST00000528088 GLIS3Q8NEA6 775 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 POMGNT1Q8WZA1 660 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 ERCC4Q92889 916 aaPredicted RBP12.01□□□□□ -0.49
CCDC84-205ENST00000528088 FAM193BQ96PV7 902 aaPredicted RBP12.01□□□□□ -0.49
CCDC84-205ENST00000528088 MSTO1Q9BUK6 570 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 MRPL9Q9BYD2 267 aaKnown RBP12.01□□□□□ -0.49
CCDC84-205ENST00000528088 GBP3Q9H0R5 595 aa12.01□□□□□ -0.49
CCDC84-205ENST00000528088 MRPL42Q9Y6G3 142 aaKnown RBP12.01□□□□□ -0.49
CCDC84-205ENST00000528088 RALGAPA2Q2PPJ7 1873 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 UBE4BO95155 1302 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 GRM6O15303 877 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 EIF3DO15371 548 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC84-205ENST00000528088 KLRC4O43908 158 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 RECQL4O94761 1208 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 KIF20AO95235 890 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 POMCP01189 267 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 MCF2P10911 925 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 MAP7D1Q3KQU3 841 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 SEZ6Q53EL9 994 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 NOMO2Q5JPE7 1267 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 CLLU1OSQ5K130 101 aa12□□□□□ -0.49
CCDC84-205ENST00000528088 SLFN12LQ6IEE8 588 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms