RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TMEM189-UBE2V1I3L0A0 370 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PODXLO00592 558 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 C2CD2LO14523 706 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 FSCN2O14926 492 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 CALUO43852 315 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 EXOC3O60645 756 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PRPF40AO75400 957 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 RHOBTB3O94955 611 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 KIF4AO95239 1232 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 TNNC2P02585 160 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 SOD2P04179 222 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ADH1AP07327 375 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 TMEM191BP0C7N4 346 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PRR29P0C7W0 189 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 CTSAP10619 480 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 CYP3A5P20815 502 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PAX3P23760 479 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 DNAJB1P25685 340 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 RPL13P26373 211 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 KLRC2P26717 231 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 MCM4P33991 863 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 IRS1P35568 1242 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PPP1R2P41236 205 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 TNFSF9P41273 254 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 CYP2J2P51589 502 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 MRPS5P82675 430 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 TFAMQ00059 246 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 EHHADHQ08426 723 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 KCNA1Q09470 495 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 DPYDQ12882 1025 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PNOCQ13519 176 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 KCNB1Q14721 858 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ENOX2Q16206 610 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 BMT2Q1RMZ1 405 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 SLC10A6Q3KNW5 377 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 XKR4Q5GH76 650 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 JADE1Q6IE81 842 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 SLC39A4Q6P5W5 647 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ALKAL1Q6UXT8 129 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 EPM2AIP1Q7L775 607 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 RBM23Q86U06 439 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 TMEM173Q86WV6 379 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 CEP57Q86XR8 500 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 BRSK2Q8IWQ3 736 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 EFHBQ8N7U6 833 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 MRPL43Q8N983 215 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 XXYLT1Q8NBI6 393 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 GSTCDQ8NEC7 633 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZNF507Q8TCN5 953 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 HASPINQ8TF76 798 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 SCFD1Q8WVM8 642 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ATXN2LQ8WWM7 1075 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PABPC5Q96DU9 382 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 SAAL1Q96ER3 474 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ANKRD36BP1Q96IX9 119 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZNF560Q96MR9 790 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 GSDMAQ96QA5 445 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 FNBP1Q96RU3 617 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 TSG101Q99816 390 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 CBWD1Q9BRT8 395 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 STRA6Q9BX79 667 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 FGFBP2Q9BYJ0 223 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZBP1Q9H171 429 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 PCIF1Q9H4Z3 704 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 IGFLR1Q9H665 355 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 UBE2ZQ9H832 354 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 AGPAT3Q9NRZ7 376 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 MARCH5Q9NX47 278 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 MIOSQ9NXC5 875 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 CLDND1Q9NY35 253 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 HSPBP1Q9NZL4 362 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 CPSF3Q9UKF6 684 aaKnown RBP5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 FRMD4BQ9Y2L6 1034 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 C2CD2Q9Y426 696 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 GOLGA8IPA6NC78 632 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 C2orf71A6NGG8 1288 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 GOLGA8JA6NMD2 632 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 H7C4K7 107 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 PDXKO00764 312 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 PSMA7O14818 248 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 KLRC4O43908 158 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 FAM189A1O60320 539 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 B4GALT3O60512 393 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 NFICP08651 508 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 KCNA5P22460 613 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ADSSP30520 456 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 PNPLA4P41247 253 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 CLCNKBP51801 687 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ERVFC1P60507 584 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 SPAG1Q07617 926 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 HYAL1Q12794 435 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 STK4Q13043 487 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 SNW1Q13573 536 aaKnown RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 PTPN14Q15678 1187 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 SNRNP35Q16560 246 aaKnown RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 DUSP6Q16828 381 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 UPP1Q16831 310 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 PUS10Q3MIT2 529 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms