RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 EDARQ9UNE0 448 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 LIMCH1Q9UPQ0 1083 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 TMEM5Q9Y2B1 443 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 SLC4A7Q9Y6M7 1214 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 BAZ2AQ9UIF9 1905 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 A6NNZ2 444 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 KIF28PB7ZC32 967 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 SPECC1L-ADORA2AF8WAN1 911 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 ZW10O43264 779 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 ZSCAN12O43309 604 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 GUCY1B2O75343 617 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 TACC1O75410 805 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 CNOT4O95628 575 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 POP4O95707 220 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 POLR3DP05423 398 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 GJB1P08034 283 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 MTHFD1P11586 935 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 PDE6AP16499 860 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 CTRB1P17538 263 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 RXRAP19793 462 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 M6PRP20645 277 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 PRKACBP22694 351 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 HOXC12P31275 282 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 EVI2BP34910 448 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 ARHGAP25P42331 645 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 RAD52P43351 418 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 LMAN1P49257 510 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 HMGCS2P54868 508 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 RPP38P78345 283 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 MRPS25P82663 173 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 MTMR2Q13614 643 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 SQLEQ14534 574 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 TUBB8Q3ZCM7 444 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 FAM26DQ5JW98 314 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 SNX30Q5VWJ9 437 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 IL23RQ5VWK5 629 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 CTRB2Q6GPI1 263 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 OR7E24Q6IFN5 339 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 KLC3Q6P597 504 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 USP17L2Q6R6M4 530 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 RSRC2Q7L4I2 434 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 YTHDF3Q7Z739 585 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 PHLDB2Q86SQ0 1253 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 ADGRA1Q86SQ6 560 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 SLC51BQ86UW2 128 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 LRRC47Q8N1G4 583 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 MGARPQ8TDB4 240 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 DQX1Q8TE96 717 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 COL26A1Q96A83 441 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 GMCL1Q96IK5 515 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 C12orf42Q96LP6 360 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 KATNAL1Q9BW62 490 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 ARHGAP39Q9C0H5 1083 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 B3GNT4Q9C0J1 378 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 WNT5BQ9H1J7 359 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 GOLPH3LQ9H4A5 285 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 DCTPP1Q9H773 170 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 ELAC1Q9H777 363 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 SH2D4AQ9H788 454 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 UCK1Q9HA47 277 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 NCOA5Q9HCD5 579 aaKnown RBP8.04□□□□□ -1.12
HDAC3-216ENST00000523088 IL1RAPL2Q9NP60 686 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 SLC39A2Q9NP94 309 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 UBN1Q9NPG3 1134 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 PAG1Q9NWQ8 432 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 HPF1Q9NWY4 346 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 MORF4L1Q9UBU8 362 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
HDAC3-216ENST00000523088 FAM196BA6NMK8 535 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 APOL1O14791 398 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 SLC7A4O43246 635 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 GLRX3O76003 335 aaKnown RBP8.03□□□□□ -1.12
HDAC3-216ENST00000523088 GUCA1CO95843 209 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 NPPAP01160 153 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 APOEP02649 317 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 KRT1P04264 644 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 ITGB3P05106 788 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 C6orf222P0C671 652 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-216ENST00000523088 NOS3P29474 1203 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 MAPK4P31152 587 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 HNF1BP35680 557 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 CHKAP35790 457 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 HTR3AP46098 478 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 TUFMP49411 452 aaKnown RBP8.03□□□□□ -1.12
HDAC3-216ENST00000523088 CCNA1P78396 465 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 PRKCZQ05513 592 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 UBE3CQ15386 1083 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 MOGQ16653 247 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 ABCB5Q2M3G0 1257 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 WSCD2Q2TBF2 565 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 CERKLQ49MI3 558 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-216ENST00000523088 ZMYM1Q5SVZ6 1142 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 TREML2Q5T2D2 321 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 AADACL4Q5VUY2 407 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 SARM1Q6SZW1 724 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 LRSAM1Q6UWE0 723 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 C1orf122Q6ZSJ8 110 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 RHOUQ7L0Q8 258 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
HDAC3-216ENST00000523088 FAM9CQ8IZT9 166 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms