RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 CPNE8Q86YQ8 564 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SH2D3CQ8N5H7 860 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 AVL9Q8NBF6 648 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 ELOA3Q8NG57 546 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 OR2I1PQ8NGU4 316 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 CENPTQ96BT3 561 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 EID2BQ96D98 161 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SCARF2Q96GP6 870 aaPredicted RBP4.5□□□□□ -1.69
SKP1-209ENST00000522552 MAML3Q96JK9 1138 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SNX22Q96L94 193 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 MXD3Q9BW11 206 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 GPR63Q9BZJ6 419 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 TSPY26PQ9H489 355 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 PIDD1Q9HB75 910 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 TRPV4Q9HBA0 871 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 XAB2Q9HCS7 855 aaKnown RBP4.5□□□□□ -1.69
SKP1-209ENST00000522552 CCDC177Q9NQR7 707 aaPredicted RBP4.5□□□□□ -1.69
SKP1-209ENST00000522552 SACM1LQ9NTJ5 587 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 EPS15L1Q9UBC2 864 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 TBK1Q9UHD2 729 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SNX8Q9Y5X2 465 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 NUMBLQ9Y6R0 609 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 CLSPNQ9HAW4 1339 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SHISA3A0PJX4 238 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 SLC7A4O43246 635 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 PGM3O95394 542 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 ANXA2P07355 339 aaKnown RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 CSF1P09603 554 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 ADH5P11766 374 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 TYRP14679 529 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 FOSL1P15407 271 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 ABCD1P33897 745 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 MCAMP43121 646 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 AFF3P51826 1226 aaKnown RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 HSD17B7P56937 341 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 PSMC1P62191 440 aaKnown RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 ACVR2BQ13705 512 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 EIF4A2Q14240 407 aaKnown RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 TARBP2Q15633 366 aaKnown RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 CTXN3Q4LDR2 81 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 MAP3K21Q5TCX8 1036 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 TATDN1Q6P1N9 297 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 KLHL17Q6TDP4 642 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 UNC5DQ6UXZ4 953 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 EPHX4Q8IUS5 362 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 SMYD4Q8IYR2 804 aaPredicted RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 GLIS1Q8NBF1 620 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 C3orf20Q8ND61 904 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 TOR1AIP2Q8NFQ8 470 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 OR1N1Q8NGS0 311 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 GOT1L1Q8NHS2 421 aaPredicted RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 STON2Q8WXE9 905 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 NMD3Q96D46 503 aaKnown RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 SUCLG2Q96I99 432 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 MRGPRX1Q96LB2 322 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 TWNKQ96RR1 684 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 MYL10Q9BUA6 226 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 OR10A4Q9H209 315 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 ADAM7Q9H2U9 754 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 ACAD9Q9H845 621 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 CYP4F12Q9HCS2 524 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 SERHLQ9NQF3 203 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 PNPOQ9NVS9 261 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 XPO7Q9UIA9 1087 aaKnown RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 HERC5Q9UII4 1024 aaKnown RBP4.49□□□□□ -1.69
SKP1-209ENST00000522552 PCOLCE2Q9UKZ9 415 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 RABL2BQ9UNT1 228 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 PCDHA3Q9Y5H8 950 aa4.49□□□□□ -1.69
SKP1-209ENST00000522552 TRBV23OR9-2A0A075B6M9 112 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 WTIPA6NIX2 430 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 CLCA1A8K7I4 914 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 PI4K2BG5E9Z4 385 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ERAL1O75616 437 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 APOL3O95236 402 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 SCGB1D1O95968 90 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 IGHA1P01876 353 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 MT-ND3P03897 115 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 RPLP2P05387 115 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 ACADMP11310 421 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 VAV1P15498 845 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 STMN1P16949 149 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 HOXB4P17483 251 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 SDHAP31040 664 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 BMP8BP34820 402 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 CTCFP49711 727 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 CCT4P50991 539 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 RPL11P62913 178 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 PPARDQ03181 441 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 NFRKBQ6P4R8 1299 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 UNQ6494/PRO21346Q6UXR6 183 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ZNF783Q6ZMS7 281 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 MCM10Q7L590 875 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 R3HCC1LQ7Z5L2 792 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 TSPYL5Q86VY4 417 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 USHBP1Q8N6Y0 703 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 BEND7Q8N7W2 519 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 LILRB1Q8NHL6 650 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 FATE1Q969F0 183 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 IWS1Q96ST2 819 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms