RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PWP2Q15269 919 aaKnown RBP5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZRSR2Q15696 482 aaKnown RBP5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 ADRM1Q16186 407 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 LHFPL2Q6ZUX7 228 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 USP51Q70EK9 711 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 LYSMD2Q8IV50 215 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 COG1Q8WTW3 980 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 CYFIP2Q96F07 1278 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 MANSC1Q9H8J5 431 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 BCO1Q9HAY6 547 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 PARPBPQ9NWS1 579 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 DONSONQ9NYP3 566 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 MOCS1Q9NZB8 636 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 GPRC5DQ9NZD1 345 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 ANAPC4Q9UJX5 808 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 SETD5Q9C0A6 1442 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 SPAG9O60271 1321 aaKnown RBP5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 RAD50Q92878 1312 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 TCOF1Q13428 1488 aaKnown RBP5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 ABCC10Q5T3U5 1492 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 PRR5-ARHGAP8B1AHC4 643 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 TULP2O00295 520 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 CTAGE5O15320 804 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZRANB2O95218 330 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 IL2RBP14784 551 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 KCNJ4P48050 445 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 MTNR1BP49286 362 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 GTF2A1P52655 376 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 SRSF2Q01130 221 aaKnown RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 SAFB2Q14151 953 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 BECN1Q14457 450 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZNF771Q7L3S4 317 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 DOK3Q7L591 496 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 KCNK18Q7Z418 384 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 PNMA8AQ86V59 439 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 AFAP1Q8N556 730 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 MDGA1Q8NFP4 955 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 RIN2Q8WYP3 895 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 FAM193BQ96PV7 902 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 CPPED1Q9BRF8 314 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 VTA1Q9NP79 307 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 MED4Q9NPJ6 270 aa5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 TYW1Q9NV66 732 aaKnown RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZNF644Q9H582 1327 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P13-201ENST00000511263 MAPKBP1O60336 1514 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 MAGI3Q5TCQ9 1506 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 ERCC6L2Q5T890 1561 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 NCOA1Q15788 1441 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 AKNAQ7Z591 1439 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 UQCRHLA0A096LP55 91 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 MPHOSPH10O00566 681 aaKnown RBP5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 ITGA10O75578 1167 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 AMHP03971 560 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 UQCRHP07919 91 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 MYBL2P10244 700 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 AGXTP21549 392 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 CASRP41180 1078 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 RIPK4P57078 832 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 EVA1CP58658 441 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 NRN1LQ496H8 165 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 PPP4R3AQ6IN85 833 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 MIGA2Q7L4E1 593 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 RPAINQ86UA6 219 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZSCAN30Q86W11 494 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 C1orf210Q8IVY1 113 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 SDR16C5Q8N3Y7 309 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZNF808Q8N4W9 903 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 OR7D4Q8NG98 312 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZFP28Q8NHY6 868 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 ATXN2LQ8WWM7 1075 aaKnown RBP5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 WWC2-AS2Q96NR7 200 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 GPR87Q9BY21 358 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 VPS11Q9H270 941 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 LANCL2Q9NS86 450 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 TMEM140Q9NV12 185 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 TRHDEQ9UKU6 1024 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 NEO1Q92859 1461 aa5.43□□□□□ -1.54
HMGB3P13-201ENST00000511263 GLI2P10070 1586 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 FSD2A1L4K1 749 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 CYR61O00622 381 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 XPOTO43592 962 aaKnown RBP5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 TMEM127O75204 238 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 PEX11BO96011 259 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 SETSIPP0DME0 302 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 RBP3P10745 1247 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 HSPA5P11021 654 aaKnown RBP5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 VCAM1P19320 739 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 MCM5P33992 734 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 FLT3LGP49771 235 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 HMGN5P82970 282 aaKnown RBP5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 ACAP1Q15027 740 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 ACAP2Q15057 778 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 MST1LQ2TV78 715 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 USP39Q53GS9 565 aaKnown RBP5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 SASS6Q6UVJ0 657 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 Q6ZSN1 163 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 C1orf162Q8NEQ5 155 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 TSPEARQ8WU66 669 aa5.42□□□□□ -1.54
HMGB3P13-201ENST00000511263 FAXDC2Q96IV6 333 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms