RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 NR2F2P24468 414 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ENTPD1P49961 510 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ALDH18A1P54886 795 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 MTTPP55157 894 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 OXCT1P55809 520 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 OCRLQ01968 901 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 PPIDQ08752 370 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 GRB10Q13322 594 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 TRIP10Q15642 601 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SEPT7Q16181 437 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 RALGPS1Q5JS13 557 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ZFYVE27Q5T4F4 411 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ARL6IP4Q66PJ3 421 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 OGFOD2Q6N063 350 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 FBXL19Q6PCT2 694 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 RNF111Q6ZNA4 994 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 PRR23BQ6ZRT6 265 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 LRP10Q7Z4F1 713 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 NLRX1Q86UT6 975 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SEPT12Q8IYM1 358 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 MYOCDQ8IZQ8 938 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 RAB3IL1Q8TBN0 382 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 HES6Q96HZ4 224 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 CNNM2Q9H8M5 875 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 USP29Q9HBJ7 922 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 NDE1Q9NXR1 346 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SUCLA2Q9P2R7 463 aaPredicted RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC17A7Q9P2U7 560 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 MICAL3Q7RTP6 2002 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SIGLEC1Q9BZZ2 1709 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 MAP3K15Q6ZN16 1313 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 RBAK-RBAKDNI3L0D1 243 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 WFS1O76024 890 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ZBTB7AO95365 584 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 RARGP13631 454 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 COMTP21964 271 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 HALP42357 657 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ASPHQ12797 758 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 STRN3Q13033 797 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 NR1H3Q13133 447 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 MED21Q13503 144 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ANO4Q32M45 955 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 MYLK3Q32MK0 819 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 CCDC92Q53HC0 331 aaPredicted RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC2A7Q6PXP3 512 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 USP17L6PQ6QN14 398 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 RNF148Q8N7C7 305 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC44A5Q8NCS7 719 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 PLBD2Q8NHP8 589 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 CABLES1Q8TDN4 633 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SNX29Q8TEQ0 813 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 C10orf82Q8WW14 230 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ARHGEF1Q92888 912 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 TTC17Q96AE7 1141 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 DHRS1Q96LJ7 313 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 TSG101Q99816 390 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 HERPUD2Q9BSE4 406 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 NMUR2Q9GZQ4 415 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 TRABDQ9H4I3 376 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 EPS8L2Q9H6S3 715 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SACM1LQ9NTJ5 587 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 NINJ2Q9NZG7 142 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ADAMTS6Q9UKP5 1117 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 HDAC9Q9UKV0 1011 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 STXBP5LQ9Y2K9 1186 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 MYO5AQ9Y4I1 1855 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 ABCC12Q96J65 1359 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 CNTNAP5Q8WYK1 1306 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 EXOC1LA0A1B0GW35 172 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 FAM47DPA6NHR8 397 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 KRT4P19013 534 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 PON1P27169 355 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 LTKP29376 864 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 FKBP3Q00688 224 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 GAD2Q05329 585 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 ALCAMQ13740 583 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 NONOQ15233 471 aaKnown RBP eCLIP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 ZRSR2Q15696 482 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 ESCO1Q5FWF5 840 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 SYT2Q8N9I0 419 aaPredicted RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 RBM15BQ8NDT2 890 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 TBCKQ8TEA7 893 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 GAB3Q8WWW8 586 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 IP6K1Q92551 441 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 ZNF75CPQ92670 426 aaPredicted RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 ZNF653Q96CK0 615 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 CALML4Q96GE6 196 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 MRPL1Q9BYD6 325 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 CCDC134Q9H6E4 229 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 PSTPIP2Q9H939 334 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 MRGBPQ9NV56 204 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 STK32BQ9NY57 414 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 PPARGC1AQ9UBK2 798 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 FRMPD1Q5SYB0 1578 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 MYO3BQ8WXR4 1341 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 SPOPO43791 374 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC37A4O43826 429 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 CCDC22O60826 627 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 BMP15O95972 392 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 GAS8O95995 478 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms