RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 BLOC1S2Q6QNY1 142 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 KRT25Q7Z3Z0 450 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 FAM3CQ92520 227 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 TCEAL4Q96EI5 215 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 SNTG2Q9NY99 539 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 ATRXP46100 2492 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 TTLL13PA6NNM8 815 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 CHURC1-FNTBB4DL54 471 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 DGAT1O75907 488 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 RECQL4O94761 1208 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 SLITRK3O94933 977 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 CHRNB1P11230 501 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 RPS6KB1P23443 525 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 CXCL12P48061 93 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 FNTBP49356 437 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 EVCP57679 992 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 SSRP1Q08945 709 aaKnown RBP17.28■□□□□ 0.36
HDAC6-236ENST00000498808 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-236ENST00000498808 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 MAP4K3Q8IVH8 894 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 TPH2Q8IWU9 490 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 TRIM22Q8IYM9 498 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 DDX27Q96GQ7 796 aaKnown RBP17.28■□□□□ 0.36
HDAC6-236ENST00000498808 TRMT61BQ9BVS5 477 aaKnown RBP17.28■□□□□ 0.36
HDAC6-236ENST00000498808 ZFP14Q9HCL3 533 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 ZNF334Q9HCZ1 680 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-236ENST00000498808 SNX14Q9Y5W7 946 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 PIAS3Q9Y6X2 628 aa17.28■□□□□ 0.36
HDAC6-236ENST00000498808 ARHGEF37A1IGU5 675 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 TBX3O15119 743 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 DEXIO95424 95 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 GCFC2P16383 781 aaKnown RBP17.27■□□□□ 0.36
HDAC6-236ENST00000498808 PTPN2P17706 415 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 TKTP29401 623 aaKnown RBP17.27■□□□□ 0.36
HDAC6-236ENST00000498808 CCR2P41597 374 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 N4BP2L1Q5TBK1 243 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-236ENST00000498808 GALNT17Q6IS24 598 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 CD300LGQ6UXG3 332 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 VITQ6UXI7 678 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 PPP4R3CPQ6ZMV5 832 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 NEK8Q86SG6 692 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 DDX1Q92499 740 aaKnown RBP17.27■□□□□ 0.36
HDAC6-236ENST00000498808 IRF7Q92985 503 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 ASB16Q96NS5 453 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 POLR3FQ9H1D9 316 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-236ENST00000498808 TRPV5Q9NQA5 729 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 BACE2Q9Y5Z0 518 aa17.27■□□□□ 0.36
HDAC6-236ENST00000498808 SDK1Q7Z5N4 2213 aa17.27■□□□□ 0.35
HDAC6-236ENST00000498808 NCANO14594 1321 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 GREB1Q4ZG55 1949 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 TMEM189-UBE2V1I3L0A0 370 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 K7ESF4 209 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 CCNT1O60563 726 aaKnown RBP17.26■□□□□ 0.35
HDAC6-236ENST00000498808 LYPLA2O95372 231 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 GDI1P31150 447 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 SHC2P98077 582 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 ROR1Q01973 937 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 PRIMPOLQ96LW4 560 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 CORO1BQ9BR76 489 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 PDZD7Q9H5P4 517 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 GPRC5CQ9NQ84 441 aa17.26■□□□□ 0.35
HDAC6-236ENST00000498808 CCDC194A0A1B0GVG4 234 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 WDR27A2RRH5 827 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 LRRIQ4A6NIV6 560 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 I3L4J1 428 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 TM4SF5O14894 197 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 B3GAT3O94766 335 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 LRG1P02750 347 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 PSMC3P17980 439 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 RARRES1P49788 294 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 IL31Q6EBC2 164 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 NOSTRINQ8IVI9 506 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-236ENST00000498808 SPEM1Q8N4L4 309 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 C3orf58Q8NDZ4 430 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 ZSWIM3Q96MP5 696 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 HSD17B14Q9BPX1 270 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
HDAC6-236ENST00000498808 FZD8Q9H461 694 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 ANKEF1Q9NU02 776 aa17.25■□□□□ 0.35
HDAC6-236ENST00000498808 PRMT7Q9NVM4 692 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-236ENST00000498808 TRIP11Q15643 1979 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 ARNTLO00327 626 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 MARCH6O60337 910 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 FOXD2O60548 495 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-236ENST00000498808 ABLIM3O94929 683 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 PAPSS2O95340 614 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-236ENST00000498808 CCNE1P24864 410 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 HOXC13P31276 330 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 CNR2P34972 360 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 VIPR2P41587 438 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 BRCC3P46736 316 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 CLCNKBP51801 687 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 LIMK1P53667 647 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 PTGDRQ13258 359 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 COL9A2Q14055 689 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-236ENST00000498808 FAM187BQ17R55 369 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 WDR44Q5JSH3 913 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms