RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RSPO2Q6UXX9 243 aaPredicted RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 OTOP3Q7RTS5 596 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 ALYREFQ86V81 257 aaKnown RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 GPBP1Q86WP2 473 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 TMEM130Q8N3G9 435 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 TMEM161BQ8NDZ6 487 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 CMASQ8NFW8 434 aaPredicted RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 RASSF8Q8NHQ8 419 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 HDAC7Q8WUI4 952 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 SPIRE2Q8WWL2 714 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 RSAD2Q8WXG1 361 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 C18orf25Q96B23 403 aaPredicted RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 ZNF707Q96C28 371 aaPredicted RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 AK8Q96MA6 479 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 TIPINQ9BVW5 301 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 BACH2Q9BYV9 841 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 ZHX3Q9H4I2 956 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 PLEKHA4Q9H4M7 779 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 WDR6Q9NNW5 1121 aaKnown RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 ANKFY1Q9P2R3 1169 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 KCNG1Q9UIX4 513 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 CLIC4Q9Y696 253 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 USP34Q70CQ2 3546 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 ABLIM1O14639 778 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 CLDN3O15551 220 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 MEFVO15553 781 aaPredicted RBP10.5□□□□□ -0.73
MSH5-218ENST00000494646 ZMYND10O75800 440 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 KRT18P05783 430 aaKnown RBP10.5□□□□□ -0.73
MSH5-218ENST00000494646 MAPTP10636 758 aaKnown RBP10.5□□□□□ -0.73
MSH5-218ENST00000494646 SYT1P21579 422 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 TKTP29401 623 aaKnown RBP10.5□□□□□ -0.73
MSH5-218ENST00000494646 MARCKSP29966 332 aaPredicted RBP10.5□□□□□ -0.73
MSH5-218ENST00000494646 AVPR2P30518 371 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 VCPP55072 806 aaKnown RBP10.5□□□□□ -0.73
MSH5-218ENST00000494646 SLC10A6Q3KNW5 377 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 XKR4Q5GH76 650 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 ELMSAN1Q6PJG2 1045 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 USP49Q70CQ1 688 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 HAUS6Q7Z4H7 955 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 BRAPQ7Z569 592 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 UBALD2Q8IYN6 164 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 KCTD17Q8N5Z5 321 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 MYCT1Q8N699 235 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 C3orf58Q8NDZ4 430 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 PRSS33Q8NF86 280 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 PIK3R5Q8WYR1 880 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 EPSTI1Q96J88 318 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 MYADMQ96S97 322 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 REEP2Q9BRK0 252 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 PANK2Q9BZ23 570 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 HAPLN2Q9GZV7 340 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 KCNK12Q9HB15 430 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 TOPORSQ9NS56 1045 aaPredicted RBP10.5□□□□□ -0.73
MSH5-218ENST00000494646 BLOC1S4Q9NUP1 217 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 ANK1P16157 1881 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 KMT2EQ8IZD2 1858 aa10.5□□□□□ -0.73
MSH5-218ENST00000494646 PODXLO00592 558 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 CCL16O15467 120 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 TOM1L1O75674 476 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 FAM13AO94988 1023 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 PLCG1P19174 1290 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 FGFR3P22607 806 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 DDIT3P35638 169 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 LONP1P36776 959 aaKnown RBP10.49□□□□□ -0.73
MSH5-218ENST00000494646 NCKAP1LP55160 1127 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 ARPP19P56211 112 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 NTHL1P78549 312 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 CREMQ03060 361 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 ELAVL2Q12926 359 aaKnown RBP10.49□□□□□ -0.73
MSH5-218ENST00000494646 TDGQ13569 410 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 GSE1Q14687 1217 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 PPM1LQ5SGD2 360 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.49□□□□□ -0.73
MSH5-218ENST00000494646 GET4Q7L5D6 327 aaPredicted RBP10.49□□□□□ -0.73
MSH5-218ENST00000494646 GRASPQ7Z6J2 395 aaPredicted RBP10.49□□□□□ -0.73
MSH5-218ENST00000494646 GPR65Q8IYL9 337 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 RAD54LQ92698 747 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 BICD1Q96G01 975 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 SNX27Q96L92 541 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 UROC1Q96N76 676 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 CLIC6Q96NY7 704 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 KCND2Q9NZV8 630 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 LARSQ9P2J5 1176 aaKnown RBP10.49□□□□□ -0.73
MSH5-218ENST00000494646 CDY1Q9Y6F8 540 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 NOTCH4Q99466 2003 aa10.49□□□□□ -0.73
MSH5-218ENST00000494646 TMEM189-UBE2V1I3L0A0 370 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 TRAPPC3O43617 180 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 NARSO43776 548 aaKnown RBP10.48□□□□□ -0.73
MSH5-218ENST00000494646 TRAK2O60296 914 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 BMP15O95972 392 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 C8AP07357 584 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 KCNE1P15382 129 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 PDCP20941 246 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 NMT1P30419 496 aaKnown RBP10.48□□□□□ -0.73
MSH5-218ENST00000494646 TNFSF9P41273 254 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 NHLH1Q02575 133 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 RAB33AQ14088 237 aa10.48□□□□□ -0.73
MSH5-218ENST00000494646 NOLC1Q14978 699 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms