RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
SNX17-208ENST00000493711 CXCL8P10145 99 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 ATF7P17544 494 aaPredicted RBP13.47□□□□□ -0.25
SNX17-208ENST00000493711 AKAP5P24588 427 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 TNFSF9P41273 254 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 MAGEA10P43363 369 aaPredicted RBP13.47□□□□□ -0.25
SNX17-208ENST00000493711 CLDN10P78369 228 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 CETN1Q12798 172 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 TCTN1Q2MV58 587 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 SLC10A6Q3KNW5 377 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 ZBTB41Q5SVQ8 909 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 AGMOQ6ZNB7 445 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 OTOP2Q7RTS6 562 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 IRF2BP1Q8IU81 584 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 WDR49Q8IV35 697 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 TRIM59Q8IWR1 403 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 CRIPAKQ8N1N5 446 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 CEP120Q8N960 986 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 PARD3BQ8TEW8 1205 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 TOP1MTQ969P6 601 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 BORCS6Q96GS4 357 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 SLC9A7Q96T83 725 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 CGRRF1Q99675 332 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.47□□□□□ -0.253e-6■■■□□ 14.8
SNX17-208ENST00000493711 APOL6Q9BWW8 343 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 TMEM117Q9H0C3 514 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 LIMA1Q9UHB6 759 aaKnown RBP13.47□□□□□ -0.25
SNX17-208ENST00000493711 HES2Q9Y543 173 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 SLC4A7Q9Y6M7 1214 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 EVPLQ92817 2033 aa13.47□□□□□ -0.25
SNX17-208ENST00000493711 TRIP12Q14669 1992 aaPredicted RBP13.47□□□□□ -0.25
SNX17-208ENST00000493711 A0A1W2PPC1 479 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 ARL5CA6NH57 179 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 LRRC10BA6NIK2 292 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 PMM2O15305 246 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 P4HA2O15460 535 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 TNNC2P02585 160 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 TPM3P06753 285 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 TNNI1P19237 187 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 CYP3A5P20815 502 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 PAX3P23760 479 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 MAN2A1Q16706 1144 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 DUOXA2Q1HG44 320 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 FILIP1LQ4L180 1135 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 SEZ6Q53EL9 994 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 NOMO2Q5JPE7 1267 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 CREBRFQ8IUR6 639 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 TMEM192Q8IY95 271 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 RNF214Q8ND24 703 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 BEST2Q8NFU1 509 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 EEF2KMTQ96G04 330 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 ANKRD36BP1Q96IX9 119 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 TUBGCP2Q9BSJ2 902 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.25
SNX17-208ENST00000493711 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.25
SNX17-208ENST00000493711 SIP14410 1827 aa13.46□□□□□ -0.26
SNX17-208ENST00000493711 SMIM28A0A1B0GU29 152 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 OFD1O75665 1012 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 AFPP02771 609 aaKnown RBP13.45□□□□□ -0.26
SNX17-208ENST00000493711 THP07101 528 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 TMEM191BP0C7N4 346 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 DLATP10515 647 aaKnown RBP13.45□□□□□ -0.26
SNX17-208ENST00000493711 EPHB4P54760 987 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 GRIK3Q13003 919 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 TCERG1LQ5VWI1 586 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.45□□□□□ -0.264e-9■■■■■ 37.8
SNX17-208ENST00000493711 ZSWIM2Q8NEG5 633 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 SLC35C1Q96A29 364 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 UROC1Q96N76 676 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 GAD1Q99259 594 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 GDF15Q99988 308 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 UBE2OQ9C0C9 1292 aaKnown RBP13.45□□□□□ -0.26
SNX17-208ENST00000493711 TMEM8AQ9HCN3 771 aa13.45□□□□□ -0.26
SNX17-208ENST00000493711 R3HCC1Q9Y3T6 440 aaKnown RBP13.45□□□□□ -0.26
SNX17-208ENST00000493711 TANC1Q9C0D5 1861 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 LRRIQ3A6PVS8 624 aaPredicted RBP13.44□□□□□ -0.26
SNX17-208ENST00000493711 SOX1O00570 391 aaPredicted RBP13.44□□□□□ -0.26
SNX17-208ENST00000493711 CBFA2T2O43439 604 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 SERPINC1P01008 464 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 BMP8BP34820 402 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 MLH1P40692 756 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 KRT31Q15323 416 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 ZBTB6Q15916 424 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
SNX17-208ENST00000493711 FKBP15Q5T1M5 1219 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 RASIP1Q5U651 963 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 KRT39Q6A163 491 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 GAS2L3Q86XJ1 694 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNX17-208ENST00000493711 LPPQ93052 612 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 DDX27Q96GQ7 796 aaKnown RBP13.44□□□□□ -0.26
SNX17-208ENST00000493711 ZBED2Q9BTP6 218 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 RBSNQ9H1K0 784 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 HSD3B7Q9H2F3 369 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 INTS13Q9NVM9 706 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 ITGA11Q9UKX5 1188 aa13.44□□□□□ -0.26
SNX17-208ENST00000493711 MYH11P35749 1972 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms