RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 C2CD2Q9Y426 696 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 ATG2AQ2TAZ0 1938 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 SF3B1O75533 1304 aaKnown RBP eCLIP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 TISP43B9A030 160 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 MEFVO15553 781 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-212ENST00000489728 TGFB1I1O43294 461 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 PRPF40AO75400 957 aaKnown RBP12.04□□□□□ -0.48
CPSF7-212ENST00000489728 SOD2P04179 222 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 CTSAP10619 480 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 DNAJB1P25685 340 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 TNFSF9P41273 254 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 CREMQ03060 361 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 PNOCQ13519 176 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 SMC1AQ14683 1233 aaKnown RBP12.04□□□□□ -0.48
CPSF7-212ENST00000489728 COL19A1Q14993 1142 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 SURF1Q15526 300 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 NFIL3Q16649 462 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 UPP1Q16831 310 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 SEZ6Q53EL9 994 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 GLRA4Q5JXX5 417 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 ZBTB41Q5SVQ8 909 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 DCLRE1AQ6PJP8 1040 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 CRELD2Q6UXH1 353 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-212ENST00000489728 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-212ENST00000489728 SLC9A9Q8IVB4 645 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 BRSK2Q8IWQ3 736 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 BCL7CQ8WUZ0 217 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-212ENST00000489728 FBXL18Q96ME1 805 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 ZMAT2Q96NC0 199 aaKnown RBP12.04□□□□□ -0.48
CPSF7-212ENST00000489728 TCF25Q9BQ70 676 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 CBWD1Q9BRT8 395 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 FAM213AQ9BRX8 229 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 HERC2P3Q9BVR0 1158 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 ZBP1Q9H171 429 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 RBAKQ9NYW8 714 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-212ENST00000489728 TRAF3IP3Q9Y228 551 aa12.04□□□□□ -0.48
CPSF7-212ENST00000489728 PRRC2BQ5JSZ5 2229 aaKnown RBP12.03□□□□□ -0.48
CPSF7-212ENST00000489728 TRIP11Q15643 1979 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 COL6A3P12111 3177 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 CASTOR2A6NHX0 329 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 ZNF233A6NK53 670 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 LACTBL1A8MY62 500 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 NT5C1B-RDH14C9J2C7 533 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 TRAPPC3O43617 180 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 C1RP00736 705 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 LRPAP1P30533 357 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 ACOT2P49753 483 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 TMEM132DQ14C87 1099 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 ZNF658Q5TYW1 1059 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-212ENST00000489728 SPATA1Q5VX52 437 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 PDXDC1Q6P996 788 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 VPS52Q8N1B4 723 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 XXYLT1Q8NBI6 393 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 CXCL16Q9H2A7 254 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 IKZF4Q9H2S9 585 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 KCTD10Q9H3F6 313 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 ENTPD7Q9NQZ7 604 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 HSPBP1Q9NZL4 362 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 COG5Q9UP83 839 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 PRG3Q9Y2Y8 225 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-212ENST00000489728 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 ANK1P16157 1881 aa12.03□□□□□ -0.48
CPSF7-212ENST00000489728 CALUO43852 315 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-212ENST00000489728 TADA2AO75478 443 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 B3GAT3O94766 335 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 KIF4AO95239 1232 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 URODP06132 367 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 ERVFC1P60507 584 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 SOX4Q06945 474 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-212ENST00000489728 USP41Q3LFD5 358 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 TCEAL5Q5H9L2 206 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 JADE1Q6IE81 842 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 FUT10Q6P4F1 479 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 FOXR2Q6PJQ5 311 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 TMC7Q7Z402 723 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 NELFCDQ8IXH7 590 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 MRPL43Q8N983 215 aaKnown RBP12.02□□□□□ -0.49
CPSF7-212ENST00000489728 TRIML1Q8N9V2 468 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 SAAL1Q96ER3 474 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 VN1R3Q9BXE9 311 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.02□□□□□ -0.49
CPSF7-212ENST00000489728 MRPL17Q9NRX2 175 aaKnown RBP12.02□□□□□ -0.49
CPSF7-212ENST00000489728 CHST7Q9NS84 486 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 EYSQ5T1H1 3165 aa12.02□□□□□ -0.49
CPSF7-212ENST00000489728 C2orf71A6NGG8 1288 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 PODXLO00592 558 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 MAPK13O15264 365 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 SRGAP2BP0DMP2 458 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 RPL13P26373 211 aaKnown RBP12.01□□□□□ -0.49
CPSF7-212ENST00000489728 IRS1P35568 1242 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 GLUD2P49448 558 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 CLCNKBP51801 687 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 DSG1Q02413 1049 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 ENPEPQ07075 957 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 STIM1Q13586 685 aa12.01□□□□□ -0.49
CPSF7-212ENST00000489728 SNRNP35Q16560 246 aaKnown RBP12.01□□□□□ -0.49
CPSF7-212ENST00000489728 EDRF1Q3B7T1 1238 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms