RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 DBF4BQ8NFT6 615 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 BEST2Q8NFU1 509 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 WNT8BQ93098 351 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 EEF2KMTQ96G04 330 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 ZBTB45Q96K62 511 aaPredicted RBP7.54□□□□□ -1.2
UBR4-214ENST00000486515 TSPAN18Q96SJ8 248 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 DNAI2Q9GZS0 605 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 CDT1Q9H211 546 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 ASB7Q9H672 318 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 MMRN2Q9H8L6 949 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 PLEKHA5Q9HAU0 1116 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 GRPEL1Q9HAV7 217 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 ERVK-5Q9HDB9 667 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 FAM105AQ9NUU6 356 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 SLC38A7Q9NVC3 462 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 KANSL3Q9P2N6 904 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 TBX21Q9UL17 535 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 PCDHB2Q9Y5E7 798 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 STYXL1Q9Y6J8 313 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 MAST4O15021 2626 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 FLNBO75369 2602 aaKnown RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 BAIAP3O94812 1187 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 AFPP02771 609 aaKnown RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 ATF7P17544 494 aaPredicted RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 ADSSP30520 456 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 HOXA11P31270 313 aaPredicted RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 TFAMQ00059 246 aaKnown RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 UBXN1Q04323 297 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 RNASELQ05823 741 aaKnown RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 ENPEPQ07075 957 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 BFSP1Q12934 665 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 IQCB1Q15051 598 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 VWA3BQ502W6 1294 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 PLEKHG4Q58EX7 1191 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 PSRC1Q6PGN9 363 aaPredicted RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 TMC2Q8TDI7 906 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 TMEM174Q8WUU8 243 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 KIF12Q96FN5 646 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 DUSP9Q99956 384 aaKnown RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 ZBED2Q9BTP6 218 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 RBSNQ9H1K0 784 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 VPS16Q9H269 839 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 AGO3Q9H9G7 860 aaKnown RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 RSAD1Q9HA92 442 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 IL23AQ9NPF7 189 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 RGS18Q9NS28 235 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 SAMSN1Q9NSI8 373 aaKnown RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 DMAC2Q9NW81 257 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 SNTG2Q9NY99 539 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 USP20Q9Y2K6 914 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 GIT1Q9Y2X7 761 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 IPPQ9Y573 584 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 ZMYM2Q9UBW7 1377 aa7.53□□□□□ -1.2
UBR4-214ENST00000486515 MYH9P35579 1960 aaKnown RBP7.53□□□□□ -1.2
UBR4-214ENST00000486515 LOXHD1Q8IVV2 1947 aa7.52□□□□□ -1.2
UBR4-214ENST00000486515 TRIM43BA6NCK2 446 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 TISP43B9A030 160 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 RBAK-RBAKDNI3L0D1 243 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 NRDCO43847 1150 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 NBNO60934 754 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 AKAP3O75969 853 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 KRT19P08727 400 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 CXCL8P10145 99 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 P4HA1P13674 534 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 CSF2RAP15509 400 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 PROZP22891 400 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 AKAP5P24588 427 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 GTF2H1P32780 548 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 HOXD13P35453 343 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 MXI1P50539 228 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 MARSP56192 900 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 FANCCQ00597 558 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 MYL7Q01449 175 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 CYP24A1Q07973 514 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 TMEM132DQ14C87 1099 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 PSMD6Q15008 389 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 ST3GAL2Q16842 350 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 TSR1Q2NL82 804 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 SEZ6Q53EL9 994 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 SPOUT1Q5T280 376 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 CDKAL1Q5VV42 579 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 EEF1DP3Q658K8 133 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 KRT39Q6A163 491 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 PPFIBP1Q86W92 1011 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 ECHDC2Q86YB7 292 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 CBWD2Q8IUF1 395 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 NPAS4Q8IUM7 802 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 WDR49Q8IV35 697 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 BRSK2Q8IWQ3 736 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 HOMEZQ8IX15 550 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 ZNF397Q8NF99 534 aaPredicted RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 BADQ92934 168 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 TRIM43Q96BQ3 446 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms