RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 ANKRD54Q6NXT1 300 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 SLC39A4Q6P5W5 647 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 DCLRE1AQ6PJP8 1040 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 ALKAL1Q6UXT8 129 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
BRD9-203ENST00000475706 POMGNT1Q8WZA1 660 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 MSLNLQ96KJ4 702 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 UROC1Q96N76 676 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 ZMAT2Q96NC0 199 aaKnown RBP12.64□□□□□ -0.39
BRD9-203ENST00000475706 PYM1Q9BRP8 204 aaKnown RBP12.64□□□□□ -0.39
BRD9-203ENST00000475706 TRIM9Q9C026 710 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 SCAND2PQ9GZW5 306 aaPredicted RBP12.64□□□□□ -0.39
BRD9-203ENST00000475706 IKZF4Q9H2S9 585 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 GDPD2Q9HCC8 539 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 HCFC2Q9Y5Z7 792 aa12.64□□□□□ -0.39
BRD9-203ENST00000475706 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■■■■■ 137.9
BRD9-203ENST00000475706 FRMD3A2A2Y4 597 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 LACTBL1A8MY62 500 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 LILRB3O75022 631 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 PPP1R37O75864 691 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 B3GAT3O94766 335 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 KCNE1P15382 129 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 PFKFB1P16118 471 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 EPCAMP16422 314 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 CMA1P23946 247 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 IGFBP6P24592 240 aaPredicted RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 CASP5P51878 434 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 DSG1Q02413 1049 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 PPP2R3AQ06190 1150 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 SOX4Q06945 474 aaPredicted RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 KCNA1Q09470 495 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 ALCAMQ13740 583 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 POSTNQ15063 836 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 ZBTB41Q5SVQ8 909 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 L1TD1Q5T7N2 865 aaKnown RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 KIAA0319Q5VV43 1072 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 PRSS55Q6UWB4 352 aaPredicted RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 TMEM184AQ6ZMB5 413 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 STXBP4Q6ZWJ1 553 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 PPFIBP1Q86W92 1011 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 GRAMD1CQ8IYS0 662 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 RNF168Q8IYW5 571 aaPredicted RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 NOC3LQ8WTT2 800 aaKnown RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 HPS3Q969F9 1004 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 C18orf25Q96B23 403 aaPredicted RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 KIF12Q96FN5 646 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 C7orf25Q9BPX7 421 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 FGFBP2Q9BYJ0 223 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 MAGEF1Q9HAY2 307 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 OLFML3Q9NRN5 406 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 AGO2Q9UKV8 859 aaKnown RBP12.63□□□□□ -0.39
BRD9-203ENST00000475706 PRUNE2Q8WUY3 3088 aa12.63□□□□□ -0.39
BRD9-203ENST00000475706 A0A0B4J269 797 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 I3L4J1 428 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 PODXLO00592 558 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
BRD9-203ENST00000475706 EFEMP2O95967 443 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 SSTR3P32745 418 aaPredicted RBP12.62□□□□□ -0.39
BRD9-203ENST00000475706 BRCC3P46736 316 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 ACOT2P49753 483 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 CUL4BQ13620 913 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 KCNC3Q14003 757 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 ENOX2Q16206 610 aaKnown RBP12.62□□□□□ -0.39
BRD9-203ENST00000475706 UPP1Q16831 310 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 RTP2Q5QGT7 225 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 RARS2Q5T160 578 aaKnown RBP12.62□□□□□ -0.39
BRD9-203ENST00000475706 SYCE2Q6PIF2 218 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 UNC13DQ70J99 1090 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 C12orf76Q8N812 135 aaPredicted RBP12.62□□□□□ -0.39
BRD9-203ENST00000475706 FSIP1Q8NA03 581 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 SLC22A17Q8WUG5 538 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 TTPALQ9BTX7 342 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 STRA6Q9BX79 667 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 PLEKHA5Q9HAU0 1116 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 CHST7Q9NS84 486 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 USP15Q9Y4E8 981 aaPredicted RBP12.62□□□□□ -0.39
BRD9-203ENST00000475706 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
BRD9-203ENST00000475706 EYSQ5T1H1 3165 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 TTC28Q96AY4 2481 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 TEX28O15482 410 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 XPOTO43592 962 aaKnown RBP12.61□□□□□ -0.39
BRD9-203ENST00000475706 TRAPPC3O43617 180 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 ADH1AP07327 375 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 SLFN14P0C7P3 912 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 HOXB8P17481 243 aaPredicted RBP12.61□□□□□ -0.39
BRD9-203ENST00000475706 RPL17P18621 184 aaKnown RBP12.61□□□□□ -0.39
BRD9-203ENST00000475706 RPL9P32969 192 aaKnown RBP12.61□□□□□ -0.39
BRD9-203ENST00000475706 SYKP43405 635 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 SMAD2Q15796 467 aaKnown RBP12.61□□□□□ -0.39
BRD9-203ENST00000475706 PSMD5Q16401 504 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 FAM26FQ5R3K3 315 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 TMEM130Q8N3G9 435 aa12.61□□□□□ -0.39
BRD9-203ENST00000475706 SMRP1Q8NCR6 262 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms