RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PIK3R5Q8WYR1 880 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 SDCCAG3Q96C92 435 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 MYCBPQ99417 103 aaPredicted RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 SEC62Q99442 399 aaKnown RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 BPIFA3Q9BQP9 254 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 GLIS2Q9BZE0 524 aaPredicted RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 TLR8Q9NR97 1041 aaKnown RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 FAM217BQ9NTX9 383 aaPredicted RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 BFARQ9NZS9 450 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 PCDHA7Q9UN72 937 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 ARHGEF28Q8N1W1 1705 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 IQANK1A0A1B0GTG1 560 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 OR6C75A6NL08 312 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KPNA7A9QM74 516 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 FAM47E-STBD1D6RA91 191 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 H3BRB1 525 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 M0QYV0 167 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ECEL1O95672 775 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 FGBP02675 491 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 PTPRAP18433 802 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KRT15P19012 456 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CDC25CP30307 473 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RGS4P49798 205 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ALDH5A1P51649 535 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CCR3P51677 355 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 NPEPPSP55786 919 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF280AP59817 542 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RPS6P62753 249 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GPC5P78333 572 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RAD51AP2Q09MP3 1159 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 LRMPQ12912 555 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 PIGHQ14442 188 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 FRA10AC1Q70Z53 315 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 B4GALNT4Q76KP1 1039 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 LINC00523Q86TU6 105 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 AVL9Q8NBF6 648 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TMC2Q8TDI7 906 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 C2orf15Q8WU43 125 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TEKT4Q8WW24 435 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 OTUB1Q96FW1 271 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 USP28Q96RU2 1077 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 NIF3L1Q9GZT8 377 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KDM4CQ9H3R0 1056 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TUT1Q9H6E5 874 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 VCX3AQ9NNX9 186 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 PXMP2Q9NR77 195 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CREBZFQ9NS37 354 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 FAM207AQ9NSI2 230 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RGL1Q9NZL6 768 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 DERAQ9Y315 318 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 QSOX1O00391 747 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KLHL41O60662 606 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 HIP1RO75146 1068 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GPC4O75487 556 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GJB1P08034 283 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 HOXB8P17481 243 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 KLRC2P26717 231 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ADORA2AP29274 412 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 COASYQ13057 564 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF177Q13360 481 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SPRYD7Q5W111 196 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RESP18Q5W5W9 173 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RETSATQ6NUM9 610 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 RWDD4Q6NW29 188 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SLC27A1Q6PCB7 646 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 MTHFD1LQ6UB35 978 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF438Q7Z4V0 828 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CCDC25Q86WR0 208 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 BANK1Q8NDB2 785 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CXorf38Q8TB03 319 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SPATA18Q8TC71 538 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 AFAP1L1Q8TED9 768 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SCYL1Q96KG9 808 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GDAP1L1Q96MZ0 367 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 POP1Q99575 1024 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 C7orf25Q9BPX7 421 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 MTMR12Q9C0I1 747 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ELOVL4Q9GZR5 314 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 WNT8AQ9H1J5 351 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TMEM8AQ9HCN3 771 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GIMAP4Q9NUV9 329 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GDAQ9Y2T3 454 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SAR1BQ9Y6B6 198 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SLIT2O94813 1529 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SF3B1O75533 1304 aaKnown RBP eCLIP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 VWA5AO00534 786 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 DUSP11O75319 330 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 SPAG6O75602 509 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 TOM1L1O75674 476 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 ATP5BP06576 529 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 PYGLP06737 847 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 HIST1H2AGP0C0S8 130 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 HIST1H2ADP20671 130 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 MAP4P27816 1152 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 GNA15P30679 374 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 EIF3BP55884 814 aaKnown RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 CBX1P83916 185 aa4.89□□□□□ -1.63
CCNL1-215ENST00000474539 UAP1Q16222 522 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-215ENST00000474539 PTGISQ16647 500 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms