RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 ZFATQ9P243 1243 aa14.94□□□□□ -0.02
ABCF3-210ENST00000473311 SYNPO2Q9UMS6 1093 aa14.94□□□□□ -0.02
ABCF3-210ENST00000473311 COL11A2P13942 1736 aaPredicted RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 SLC16A4O15374 487 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 ACSL3O95573 720 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 PYGLP06737 847 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 ADRB2P07550 413 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 ITGB5P18084 799 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CNGA1P29973 690 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 RARRES1P49788 294 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 MFAP3P55082 362 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 ITIH4Q14624 930 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 SIX1Q15475 284 aaPredicted RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 LONRF1Q17RB8 773 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 SGO2Q562F6 1265 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 OTUD6AQ7L8S5 288 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 C12orf56Q8IXR9 622 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 MGARPQ8TDB4 240 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 BICD1Q96G01 975 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 PLEKHG4BQ96PX9 1271 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 EPAS1Q99814 870 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CDC42EP4Q9H3Q1 356 aaKnown RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 HERC5Q9UII4 1024 aaKnown RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 GTF3C4Q9UKN8 822 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 SMIM24O75264 130 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CYP1A2P05177 515 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 MAPTP10636 758 aaKnown RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 PDE6CP51160 858 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 PEX3P56589 373 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 DYNC1I2Q13409 638 aaKnown RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CUL3Q13618 768 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 TNIP1Q15025 636 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 HIBCHQ6NVY1 386 aaPredicted RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 MIGA2Q7L4E1 593 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 DDX23Q9BUQ8 820 aaKnown RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 ASIC3Q9UHC3 531 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CD2APQ9Y5K6 639 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 TMEM150BA6NC51 233 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 PPIP5K2O43314 1243 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CYP11B1P15538 503 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 KRT17Q04695 432 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 LRRC14Q15048 493 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CNGA2Q16280 664 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 MEX3CQ5U5Q3 659 aaKnown RBP14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CBWD2Q8IUF1 395 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 SEMA4DQ92854 862 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 GPRC5CQ9NQ84 441 aa14.93□□□□□ -0.02
ABCF3-210ENST00000473311 CLRN2A0PK11 232 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 CCND1P24385 295 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 CD151P48509 253 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 AOC3Q16853 763 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 EXOC3L1Q86VI1 746 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 SHC3Q92529 594 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 ELMO3Q96BJ8 720 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 GORASP1Q9BQQ3 440 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 PLVAPQ9BX97 442 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 CCDC134Q9H6E4 229 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.92□□□□□ -0.02
ABCF3-210ENST00000473311 TMOD2Q9NZR1 351 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 UVRAGQ9P2Y5 699 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 LRRD1A4D1F6 860 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 MMP10P09238 476 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 FAM133BQ5BKY9 247 aaKnown RBP14.92□□□□□ -0.02
ABCF3-210ENST00000473311 TRMT10CQ7L0Y3 403 aaKnown RBP14.92□□□□□ -0.02
ABCF3-210ENST00000473311 TRPM8Q7Z2W7 1104 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 ROPN1BQ9BZX4 212 aaPredicted RBP14.92□□□□□ -0.02
ABCF3-210ENST00000473311 LRRC19Q9H756 370 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 ROPN1Q9HAT0 212 aaPredicted RBP14.92□□□□□ -0.02
ABCF3-210ENST00000473311 PRDM16Q9HAZ2 1276 aa14.92□□□□□ -0.02
ABCF3-210ENST00000473311 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.92□□□□□ -0.02
ABCF3-210ENST00000473311 ZSCAN9O15535 394 aaPredicted RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 ATP4AP20648 1035 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 QARSP47897 775 aaKnown RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 GTF2BQ00403 316 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 SFSWAPQ12872 951 aaKnown RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 SNRNP35Q16560 246 aaKnown RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 MFSD5Q6N075 450 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 CCDC63Q8NA47 563 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 C12orf50Q8NA57 414 aaPredicted RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 IL31RAQ8NI17 732 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 ARHGEF2Q92974 986 aaKnown RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 DNAJC17Q9NVM6 304 aaKnown RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 SLC5A4Q9NY91 659 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 ZNFX1Q9P2E3 1918 aaKnown RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 LINGO3P0C6S8 592 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 GNAT1P11488 350 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 RANBP1P43487 201 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 CDR2Q01850 454 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 TRIP13Q15645 432 aaPredicted RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 TNFAIP8L3Q5GJ75 292 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 KRT39Q6A163 491 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 RBM41Q96IZ5 413 aaKnown RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 L3MBTL3Q96JM7 780 aaPredicted RBP14.91□□□□□ -0.02
ABCF3-210ENST00000473311 AGBL1Q96MI9 1066 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 ANAPC7Q9UJX3 599 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 BLOC1S6Q9UL45 172 aa14.91□□□□□ -0.02
ABCF3-210ENST00000473311 MAPK13O15264 365 aa14.9□□□□□ -0.02
ABCF3-210ENST00000473311 RNF8O76064 485 aa14.9□□□□□ -0.02
ABCF3-210ENST00000473311 YWHABP31946 246 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms