RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 LNX1Q8TBB1 728 aaPredicted RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 SMG7Q92540 1137 aaKnown RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 RAD54LQ92698 747 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 ZNF707Q96C28 371 aaPredicted RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 ACSF2Q96CM8 615 aaPredicted RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 CLSTN3Q9BQT9 956 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 RHOBTB2Q9BYZ6 727 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 SMOC2Q9H3U7 446 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 CNTN3Q9P232 1028 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 LARSQ9P2J5 1176 aaKnown RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 KCNG1Q9UIX4 513 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 CLIC4Q9Y696 253 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 TRIP11Q15643 1979 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 H0YCG3 227 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 I3L4J1 428 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 ADAM12O43184 909 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 PAPLNO95428 1278 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 FGFR3P22607 806 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 TKTP29401 623 aaKnown RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 BRCC3P46736 316 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 MCL1Q07820 350 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 SPECC1Q5M775 1068 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 PDXDC1Q6P996 788 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 CYP26C1Q6V0L0 522 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 OTOP3Q7RTS5 596 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 UBALD2Q8IYN6 164 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 FBXL6Q8N531 539 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 LARP4BQ92615 738 aaKnown RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 C18orf25Q96B23 403 aaPredicted RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 DDX27Q96GQ7 796 aaKnown RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 INTS4Q96HW7 963 aaKnown RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 EPSTI1Q96J88 318 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 ACAP3Q96P50 834 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 HAPLN2Q9GZV7 340 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 WDR6Q9NNW5 1121 aaKnown RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 ZDHHC7Q9NXF8 308 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 FBXO2Q9UK22 296 aaPredicted RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 FBXW11Q9UKB1 542 aa9.87□□□□□ -0.83
USF1-204ENST00000472217 MTCL1Q9Y4B5 1905 aaKnown RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 PDCD11Q14690 1871 aaKnown RBP9.87□□□□□ -0.83
USF1-204ENST00000472217 K7ELQ4 463 aaPredicted RBP9.86□□□□□ -0.83
USF1-204ENST00000472217 K7ENM7 598 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 PODXLO00592 558 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 CITO14578 2027 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 CLDN3O15551 220 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 TRAPPC3O43617 180 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 ZMYND10O75800 440 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 FAM13AO94988 1023 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 PDGFBP01127 241 aaPredicted RBP9.86□□□□□ -0.83
USF1-204ENST00000472217 KRT18P05783 430 aaKnown RBP9.86□□□□□ -0.83
USF1-204ENST00000472217 KCNE1P15382 129 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 MARCKSP29966 332 aaPredicted RBP9.86□□□□□ -0.83
USF1-204ENST00000472217 OR1D2P34982 312 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 MATR3P43243 847 aaKnown RBP eCLIP9.86□□□□□ -0.83
USF1-204ENST00000472217 ZNF131P52739 623 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 SLC10A6Q3KNW5 377 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 USP49Q70CQ1 688 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 SUGP1Q8IWZ8 645 aaKnown RBP9.86□□□□□ -0.83
USF1-204ENST00000472217 MYCT1Q8N699 235 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 KCNN1Q92952 543 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 BICD1Q96G01 975 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 PRKD2Q9BZL6 878 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 CCSER1Q9C0I3 900 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 KCNH6Q9H252 994 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 PIDD1Q9HB75 910 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 PARVGQ9HBI0 331 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 SLC38A7Q9NVC3 462 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 MTRRQ9UBK8 725 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 TBX20Q9UMR3 447 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 MTMR6Q9Y217 621 aa9.86□□□□□ -0.83
USF1-204ENST00000472217 HNRNPDLO14979 420 aaKnown RBP9.85□□□□□ -0.83
USF1-204ENST00000472217 TRAK2O60296 914 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 TBCAO75347 108 aaKnown RBP9.85□□□□□ -0.83
USF1-204ENST00000472217 C8AP07357 584 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 CXCL8P10145 99 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 GBP2P32456 591 aaPredicted RBP9.85□□□□□ -0.83
USF1-204ENST00000472217 TNFSF9P41273 254 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 LIG4P49917 911 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 CEBPZQ03701 1054 aaKnown RBP9.85□□□□□ -0.83
USF1-204ENST00000472217 RAB33AQ14088 237 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 IER5LQ5T953 404 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 LIN9Q5TKA1 542 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 RSPO2Q6UXX9 243 aaPredicted RBP9.85□□□□□ -0.83
USF1-204ENST00000472217 ANKS3Q6ZW76 656 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 STAMQ92783 540 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 CLIC6Q96NY7 704 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 MYADMQ96S97 322 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 FIZ1Q96SL8 496 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 ZHX3Q9H4I2 956 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 KCNK12Q9HB15 430 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 TUBGCP4Q9UGJ1 667 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 SRPRBQ9Y5M8 271 aaKnown RBP9.85□□□□□ -0.83
USF1-204ENST00000472217 BACE2Q9Y5Z0 518 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 CDY1Q9Y6F8 540 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 MYH15Q9Y2K3 1946 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 ZNF318Q5VUA4 2279 aa9.85□□□□□ -0.83
USF1-204ENST00000472217 TTC26A0AVF1 554 aa9.84□□□□□ -0.83
USF1-204ENST00000472217 STX6O43752 255 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms