RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 ARFIP2P53365 341 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 PER3P56645 1201 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 ZNF280AP59817 542 aaPredicted RBP2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 GPSM2P81274 684 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 PLP2Q04941 152 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 FOXL1Q12952 345 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 SEMA5AQ13591 1074 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 ZNF568Q3ZCX4 644 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 C1QL3Q5VWW1 255 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 METRNLQ641Q3 311 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 ANKS6Q68DC2 871 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 NAIF1Q69YI7 327 aaPredicted RBP2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 KRT40Q6A162 431 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 MFSD5Q6N075 450 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 MAMDC4Q6UXC1 1216 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 HEATR3Q7Z4Q2 680 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 SLC16A11Q8NCK7 471 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 IL17RDQ8NFM7 739 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 MDGA1Q8NFP4 955 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 PJA1Q8NG27 643 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 OR52N2Q8NGI0 321 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 OR5M3Q8NGP4 307 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 CCHCR1Q8TD31 782 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 STON2Q8WXE9 905 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 ANKS1AQ92625 1134 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 TTC17Q96AE7 1141 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 ZNF512Q96ME7 567 aaPredicted RBP2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 WWC2-AS2Q96NR7 200 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 GNRHR2Q96P88 292 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 CDC5LQ99459 802 aaKnown RBP2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 NDC1Q9BTX1 674 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 ATP6V0A4Q9HBG4 840 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 CD248Q9HCU0 757 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 TMEM140Q9NV12 185 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 USP40Q9NVE5 1235 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 SIDT1Q9NXL6 827 aaKnown RBP2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 PLA2G3Q9NZ20 509 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 MOCS1Q9NZB8 636 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 SH3BP1Q9Y3L3 701 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 NR2E3Q9Y5X4 410 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 ACTL7AQ9Y615 435 aa2.46□□□□□ -2.02
NUCKS1-202ENST00000464938 A0A1W2PRX2 142 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 NPEPPSL1A6NEC2 478 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 CDC14BO60729 498 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SLC43A1O75387 559 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 MAP4K4O95819 1239 aaPredicted RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 FTLP02792 175 aaPredicted RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 MYL1P05976 194 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SNRPA1P09661 255 aaKnown RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SBK3P0C264 359 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SLC5A1P13866 664 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SLC6A4P31645 630 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 PTPN7P35236 360 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 RABGGTBP53611 331 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 CLRN1P58418 232 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 RAB1AP62820 205 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 ADAM17P78536 824 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 TCF15Q12870 199 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 UBE4AQ14139 1066 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 FGL2Q14314 439 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 PLS1Q14651 629 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 GRM7Q14831 915 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 FAM214AQ32MH5 1076 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 FLYWCH1Q4VC44 716 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 PABPC1LQ4VXU2 614 aaKnown RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 FKBP15Q5T1M5 1219 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 EMC10Q5UCC4 262 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 AFMIDQ63HM1 303 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SPTY2D1Q68D10 685 aaPredicted RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SLC4A10Q6U841 1118 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 MAEAQ7L5Y9 396 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 LIMS2Q7Z4I7 341 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 RSPH3Q86UC2 560 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 FUKQ8N0W3 1084 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 KRT78Q8N1N4 520 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SVIPQ8NHG7 77 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 RAB24Q969Q5 203 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 TMX3Q96JJ7 454 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 CCDC136Q96JN2 1154 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 MRGPRX1Q96LB2 322 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 LRRC37BQ96QE4 947 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 MYOCQ99972 504 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 VRK1Q99986 396 aaPredicted RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 MRI1Q9BV20 369 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 B3GNT5Q9BYG0 378 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 CPEB1Q9BZB8 566 aaKnown RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 SENP6Q9GZR1 1112 aaPredicted RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 C11orf54Q9H0W9 315 aaPredicted RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 BHMT2Q9H2M3 363 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 MRPL46Q9H2W6 279 aaKnown RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 C12orf65Q9H3J6 166 aaKnown RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 WDCPQ9H6R7 721 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 FAM204AQ9H8W3 233 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 CHST12Q9NRB3 414 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 LMBRD1Q9NUN5 540 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 PNPOQ9NVS9 261 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 RGS17Q9UGC6 210 aaPredicted RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 ZFR2Q9UPR6 939 aaKnown RBP2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 PCDHA3Q9Y5H8 950 aa2.45□□□□□ -2.02
NUCKS1-202ENST00000464938 KRTAP23-1A1A580 65 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms