RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 GORASP1Q9BQQ3 440 aa5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 HEPHQ9BQS7 1158 aa5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 SORBS1Q9BX66 1292 aaKnown RBP5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 ING3Q9NXR8 418 aa5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 IGSF9Q9P2J2 1179 aa5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 Q9UFV3 132 aa5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 SWAP70Q9UH65 585 aa5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 AJAP1Q9UKB5 411 aaPredicted RBP5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 LRRFIP2Q9Y608 721 aaKnown RBP5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 ACTL7AQ9Y615 435 aa5.03□□□□□ -1.6
HMGN3P1-201ENST00000453847 C2orf78A6NCI8 922 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 GOLGA6L3A6NEY3 463 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 NCAM2O15394 837 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 FTH1P19P0C7X4 201 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 IL1R1P14778 569 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 RAC2P15153 192 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 SMARCA1P28370 1054 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 VIPR1P32241 457 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 ITGA8P53708 1063 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 MLLT6P55198 1093 aaPredicted RBP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 CTXN1P60606 82 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZNF792Q3KQV3 632 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZACNQ401N2 412 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 TRIM68Q6AZZ1 485 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 DPP8Q6V1X1 898 aaPredicted RBP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 GADL1Q6ZQY3 521 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 LARP4Q71RC2 724 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZC3H18Q86VM9 953 aaKnown RBP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 ATG16L2Q8NAA4 619 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 WDR48Q8TAF3 677 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZNF480Q8WV37 535 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZNF566Q969W8 418 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 SUCLG2Q96I99 432 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 UBXN10Q96LJ8 280 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 NOX5Q96PH1 765 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 RMDN3Q96TC7 470 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 SARS2Q9NP81 518 aaKnown RBP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 PIH1D1Q9NWS0 290 aaKnown RBP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 GGA3Q9NZ52 723 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 GPRC5DQ9NZD1 345 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 PDP2Q9P2J9 529 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 AFF4Q9UHB7 1163 aaKnown RBP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 FEZ2Q9UHY8 353 aaPredicted RBP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 SLC39A10Q9ULF5 831 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 MAN2B2Q9Y2E5 1009 aa5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGN3P1-201ENST00000453847 FAM234BA2RU67 622 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 OR14I1A6ND48 311 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 TISP43B9A030 160 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 B9A039 149 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 BTN3A1O00481 513 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 ALDH1A2O94788 518 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 GDF11O95390 407 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 ABHD16AO95870 558 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 MT-ND5P03915 603 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 NCAM1P13591 858 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 SSTR4P31391 388 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 SERPINF1P36955 418 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 NCKAP1LP55160 1127 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 PER3P56645 1201 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 SOX8P57073 446 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 GEMIN4P57678 1058 aaKnown RBP5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 FOXO1Q12778 655 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 MAP3K12Q12852 859 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 SMAD4Q13485 552 aaKnown RBP5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 PLCL1Q15111 1095 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 TAF5Q15542 800 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 TXLNBQ8N3L3 684 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 SMARCC2Q8TAQ2 1214 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 TRAPPC12Q8WVT3 735 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 SNX22Q96L94 193 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 KATNBL1Q9H079 304 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZHX3Q9H4I2 956 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 NRBP1Q9UHY1 535 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 MAGED2Q9UNF1 606 aaPredicted RBP5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 MED16Q9Y2X0 877 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 SLC4A7Q9Y6M7 1214 aa5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 SETD1BQ9UPS6 1966 aaKnown RBP5.01□□□□□ -1.61
HMGN3P1-201ENST00000453847 A0A087WZ62 844 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 AQP12BA6NM10 295 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 TMEM233B4DJY2 109 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 J3KRW8 73 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 IPO5O00410 1097 aaKnown RBP5□□□□□ -1.61
HMGN3P1-201ENST00000453847 ACKR2O00590 384 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 GPR32O75388 356 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 SKAP2O75563 359 aaPredicted RBP5□□□□□ -1.61
HMGN3P1-201ENST00000453847 ITGA10O75578 1167 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 CNOT4O95628 575 aaKnown RBP5□□□□□ -1.61
HMGN3P1-201ENST00000453847 CKMT1AP12532 417 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 SLC6A4P31645 630 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 MAN1A1P33908 653 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 PHKA1P46020 1223 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 CTBP1Q13363 440 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 TOP3AQ13472 1001 aaPredicted RBP5□□□□□ -1.61
HMGN3P1-201ENST00000453847 SPARCL1Q14515 664 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 LIN54Q6MZP7 749 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 OTOP2Q7RTS6 562 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 ANKRD18AQ8IVF6 992 aa5□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZDHHC14Q8IZN3 488 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms