RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 LIN9Q5TKA1 542 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 PPP1R2P3Q6NXS1 205 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 TRIM72Q6ZMU5 477 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 UBLCP1Q8WVY7 318 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-218ENST00000439806 BBXQ8WY36 941 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-218ENST00000439806 DDX1Q92499 740 aaKnown RBP11.17□□□□□ -0.62
CPNE1-218ENST00000439806 KRT35Q92764 455 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 GLG1Q92896 1179 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 ARL8AQ96BM9 186 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 FAM84AQ96KN4 292 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 PLVAPQ9BX97 442 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 MRPL4Q9BYD3 311 aaKnown RBP11.17□□□□□ -0.62
CPNE1-218ENST00000439806 CELF4Q9BZC1 486 aaKnown RBP11.17□□□□□ -0.62
CPNE1-218ENST00000439806 IMPG2Q9BZV3 1241 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 MTUS1Q9ULD2 1270 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 AGTPBP1Q9UPW5 1226 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 PCDHB2Q9Y5E7 798 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 ZSWIM8A7E2V4 1837 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 A0A0B4J269 797 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 LGR5O75473 907 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 RPS6KA5O75582 802 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 VNN1O95497 513 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 PRKCBP05771 671 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 CLTAP09496 248 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 MARK3P27448 753 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 ECHS1P30084 290 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 CTNNA1P35221 906 aaKnown RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 NSFP46459 744 aaKnown RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 MARCKSL1P49006 195 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 AP3M2P53677 418 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 HNRNPH2P55795 449 aaKnown RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 WNT7BP56706 349 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 POU5F1Q01860 360 aaKnown RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 PPIL2Q13356 520 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 CUL2Q13617 745 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 TFDP1Q14186 410 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 LY6KQ17RY6 165 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 TMEM132AQ24JP5 1023 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 CEP85LQ5SZL2 805 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 WDR78Q5VTH9 848 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 SPOPLQ6IQ16 392 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 CRELD2Q6UXH1 353 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 ZPBP2Q6X784 338 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.623e-8■□□□□ 9.3
CPNE1-218ENST00000439806 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 JAMLQ86YT9 394 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 BRSK2Q8IWQ3 736 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 MCOLN2Q8IZK6 566 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 MAGOHBQ96A72 148 aaKnown RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 CDCA5Q96FF9 252 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 BTBD6Q96KE9 485 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 JPH2Q9BR39 696 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 TCHPQ9BT92 498 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 TRIM31Q9BZY9 425 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 HAPLN2Q9GZV7 340 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 C2orf40Q9H1Z8 148 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 NEUROG2Q9H2A3 272 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 ERVK-5Q9HDB9 667 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 AVENQ9NQS1 362 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-218ENST00000439806 ANAPC7Q9UJX3 599 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 ANK1P16157 1881 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
CPNE1-218ENST00000439806 A6NNZ2 444 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 HMGB1P1B2RPK0 211 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 CLDN3O15551 220 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 THAP12O43422 761 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 CALCAP01258 141 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 UNGP13051 313 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 GBP1P32455 592 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 HSD17B3P37058 310 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 PEX5P50542 639 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 GNGT1P63211 74 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 NOP14P78316 857 aaKnown RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 NCOA4Q13772 614 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 MXD4Q14582 209 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 TUBB8Q3ZCM7 444 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 ZBTB41Q5SVQ8 909 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 CELF3Q5SZQ8 465 aaKnown RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 AADACL2Q6P093 401 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 FASTKD5Q7L8L6 764 aaKnown RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 ARMC9Q7Z3E5 817 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 SLC13A5Q86YT5 568 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 WDR49Q8IV35 697 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 DHX37Q8IY37 1157 aaKnown RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 EFCAB13Q8IY85 973 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 RBBP8NLQ8NC74 664 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-218ENST00000439806 MAIP1Q8WWC4 291 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 PIK3R5Q8WYR1 880 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 CD101Q93033 1021 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 CLMNQ96JQ2 1002 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 GPR20Q99678 358 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 CAPS2Q9BXY5 557 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 PARP2Q9UGN5 583 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 KCNH4Q9UQ05 1017 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 NR2E1Q9Y466 385 aa11.15□□□□□ -0.62
CPNE1-218ENST00000439806 EVPLQ92817 2033 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms