RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 ZBED4O75132 1171 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 ALDH1L1O75891 902 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 CRTAMO95727 393 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 MYL1P05976 194 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 CPEP16870 476 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 TRIM21P19474 475 aaKnown RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 SDSP20132 328 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 PAPOLAP51003 745 aaKnown RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 MNAT1P51948 309 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 EPHB1P54762 984 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 TPD52P55327 224 aaPredicted RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 PFKPQ01813 784 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 TNIP1Q15025 636 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 KIAA0753Q2KHM9 967 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 ALFQ53S48 1182 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 TRIM61Q5EBN2 209 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 DNAJC21Q5F1R6 531 aaKnown RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 SYCP2LQ5T4T6 812 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 AGAP9Q5VTM2 703 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 CNNM4Q6P4Q7 775 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 SASS6Q6UVJ0 657 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 RSPO2Q6UXX9 243 aaPredicted RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 RSPH3Q86UC2 560 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 MTDHQ86UE4 582 aaKnown RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 SKAP1Q86WV1 359 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 MYLK4Q86YV6 388 aaPredicted RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 ERC1Q8IUD2 1116 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 PPM1KQ8N3J5 372 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 PIP4K2CQ8TBX8 421 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 NEK9Q8TD19 979 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 TNPO1Q92973 898 aaKnown RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 JAKMIP2Q96AA8 810 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 KRTAP1-5Q9BYS1 174 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 ZNF700Q9H0M5 742 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 CTNNA3Q9UI47 895 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 MRPL11Q9Y3B7 192 aaKnown RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 RRP15Q9Y3B9 282 aaKnown RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 JRKLQ9Y4A0 524 aa4.49□□□□□ -1.69
KRR1-202ENST00000438169 BRD4O60885 1362 aaPredicted RBP4.49□□□□□ -1.69
KRR1-202ENST00000438169 CGNL1Q0VF96 1302 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 NISCHQ9Y2I1 1504 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 TBKBP1A7MCY6 615 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 CAPN14A8MX76 684 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 H0YC42 278 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 NEMFO60524 1076 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 TBCAO75347 108 aaKnown RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 STAM2O75886 525 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 DGKIO75912 1065 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 DNAJC8O75937 253 aaPredicted RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 RASGRP1O95267 797 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 LTFP02788 710 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 TPM1P09493 284 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 MYBL2P10244 700 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 GRK2P25098 689 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 MSNP26038 577 aaKnown RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 GRK3P35626 688 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 GNL1P36915 607 aaPredicted RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 CLK3P49761 638 aaKnown RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 PSMD7P51665 324 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 CSE1LP55060 971 aaKnown RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 SNX16P57768 344 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 GABREP78334 506 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 MRPL28Q13084 256 aaKnown RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 TTF1Q15361 905 aaPredicted RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 SF3B3Q15393 1217 aaKnown RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 KBTBD12Q3ZCT8 623 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 PREPLQ4J6C6 727 aaPredicted RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 CFAP58Q5T655 872 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 CD276Q5ZPR3 534 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 TSHZ3Q63HK5 1081 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 LARP4Q71RC2 724 aaKnown RBP eCLIP4.48□□□□□ -1.69
KRR1-202ENST00000438169 RUFY3Q7L099 469 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 FGD2Q7Z6J4 655 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 AHI1Q8N157 1196 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 APPL2Q8NEU8 664 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 PCDH19Q8TAB3 1148 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 ERMNQ8TAM6 284 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 GOLGA5Q8TBA6 731 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 WDR66Q8TBY9 1149 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 PHOSPHO1Q8TCT1 267 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 BICD2Q8TD16 824 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 BRSK1Q8TDC3 778 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 TCP11Q8WWU5 503 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 LRRC45Q96CN5 670 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 SCLYQ96I15 445 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 SLC39A3Q9BRY0 314 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 FAM167BQ9BTA0 163 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 NACA2Q9H009 215 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 KIAA1683Q9H0B3 1180 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 PRKRIP1Q9H875 184 aaPredicted RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 AGO3Q9H9G7 860 aaKnown RBP4.48□□□□□ -1.69
KRR1-202ENST00000438169 TRIM39Q9HCM9 518 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 TCF7L2Q9NQB0 619 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 KMT5AQ9NQR1 393 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 OGFRQ9NZT2 677 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 SPATA7Q9P0W8 599 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 TRAF3IP3Q9Y228 551 aa4.48□□□□□ -1.69
KRR1-202ENST00000438169 TMEM98Q9Y2Y6 226 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms